RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TBC1D7Q9P0N9 293 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 MICAL3Q7RTP6 2002 aa21.23■□□□□ 0.99
CCM2-216ENST00000488727 EDN1P05305 212 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 PFKMP08237 780 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 NMT1P30419 496 aaKnown RBP21.22■□□□□ 0.99
CCM2-216ENST00000488727 SMTNP53814 917 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 HERC4Q5GLZ8 1057 aaPredicted RBP21.22■□□□□ 0.99
CCM2-216ENST00000488727 NYAP1Q6ZVC0 841 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 ZBTB8OSQ8IWT0 167 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 FAM178BQ8IXR5 827 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 CCAR2Q8N163 923 aaKnown RBP21.22■□□□□ 0.99
CCM2-216ENST00000488727 CCDC112Q8NEF3 446 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 HPS3Q969F9 1004 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 C16orf45Q96MC5 204 aaPredicted RBP21.22■□□□□ 0.99
CCM2-216ENST00000488727 GDF15Q99988 308 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 C2orf40Q9H1Z8 148 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 TMX1Q9H3N1 280 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 OLFML3Q9NRN5 406 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 SEL1LQ9UBV2 794 aa21.22■□□□□ 0.99
CCM2-216ENST00000488727 PVALEFA0A1B0GWK0 134 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 GPR182O15218 404 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 TNNT1P13805 278 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 AMHR2Q16671 573 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 HAUS6Q7Z4H7 955 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 SEPT8Q92599 483 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCM2-216ENST00000488727 FZD8Q9H461 694 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 INTS13Q9NVM9 706 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 RANBP2P49792 3224 aaKnown RBP21.21■□□□□ 0.99
CCM2-216ENST00000488727 TTLL13PA6NNM8 815 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 K7ENM7 598 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 B4GALT5O43286 388 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 MAPTP10636 758 aaKnown RBP21.21■□□□□ 0.99
CCM2-216ENST00000488727 EFNA5P52803 228 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 SPATA1Q5VX52 437 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 CNKSR3Q6P9H4 555 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 ZNF365Q70YC5 407 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 CATSPER4Q7RTX7 472 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 USP20Q9Y2K6 914 aa21.21■□□□□ 0.99
CCM2-216ENST00000488727 PHLPP2Q6ZVD8 1323 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 DENND3A2RUS2 1198 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 TSPAN1O60635 241 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 RPN1P04843 607 aaKnown RBP21.2■□□□□ 0.98
CCM2-216ENST00000488727 CASP5P51878 434 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 KMT5BQ4FZB7 885 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 ZC2HC1CQ53FD0 456 aaPredicted RBP21.2■□□□□ 0.98
CCM2-216ENST00000488727 TMEM240Q5SV17 173 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 ZNF720Q7Z2F6 126 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 GLIS3Q8NEA6 775 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 APBB2Q92870 758 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 MRPL44Q9H9J2 332 aaKnown RBP21.2■□□□□ 0.98
CCM2-216ENST00000488727 KCNG1Q9UIX4 513 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 PAXBP1Q9Y5B6 917 aa21.2■□□□□ 0.98
CCM2-216ENST00000488727 PPP1R3GB7ZBB8 358 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 K7ERI5 159 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 KIF2AO00139 706 aaPredicted RBP21.19■□□□□ 0.98
CCM2-216ENST00000488727 MGEA5O60502 916 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 PPP1R37O75864 691 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 ERLIN2O94905 339 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 PRKCBP05771 671 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 HOXA11P31270 313 aaPredicted RBP21.19■□□□□ 0.98
CCM2-216ENST00000488727 TBX2Q13207 712 aaPredicted RBP21.19■□□□□ 0.98
CCM2-216ENST00000488727 MAPK6Q16659 721 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 FAM187BQ17R55 369 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 LINC01599Q8WXQ3 324 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 KCNN1Q92952 543 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 STRA6Q9BX79 667 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 TMEM134Q9H6X4 195 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 AGPAT5Q9NUQ2 364 aa21.19■□□□□ 0.98
CCM2-216ENST00000488727 USP27XA6NNY8 438 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 RIOK3O14730 519 aaKnown RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 CD44P16070 742 aaKnown RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 FAM26FQ5R3K3 315 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 OTOP2Q7RTS6 562 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 RTN4RL1Q86UN2 441 aaPredicted RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 ST6GALNAC4Q9H4F1 302 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 PRMT7Q9NVM4 692 aaPredicted RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 RMND1Q9NWS8 449 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 PTPRSQ13332 1948 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 RRP9O43818 475 aaKnown RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 FGBP02675 491 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 MYBP10242 640 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 ARF4P18085 180 aaPredicted RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 GTF2BQ00403 316 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 PCBP1Q15365 356 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCM2-216ENST00000488727 C9orf50Q5SZB4 431 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 CDKAL1Q5VV42 579 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 PSRC1Q6PGN9 363 aaPredicted RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 EXOC1Q9NV70 894 aa21.18■□□□□ 0.98
CCM2-216ENST00000488727 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
CCM2-216ENST00000488727 CNTNAP2Q9UHC6 1331 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 A0A1B0GTH6 734 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 H0YCG3 227 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 ACKR2O00590 384 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 CDK11BP21127 795 aaKnown RBP21.17■□□□□ 0.98
CCM2-216ENST00000488727 DSC3Q14574 896 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 PTPN14Q15678 1187 aa21.17■□□□□ 0.98
CCM2-216ENST00000488727 E4F1Q66K89 784 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms