RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	GCDH	Q92947	438 aa	Predicted RBP	4.41	□□□□□ -1.7
CD46-215	ENST00000488596	NKD2	Q969F2	451 aa	Predicted RBP	4.41	□□□□□ -1.7
CD46-215	ENST00000488596	VOPP1	Q96AW1	172 aa		4.41	□□□□□ -1.7
CD46-215	ENST00000488596	MYL10	Q9BUA6	226 aa		4.41	□□□□□ -1.7
CD46-215	ENST00000488596	POFUT1	Q9H488	388 aa		4.41	□□□□□ -1.7
CD46-215	ENST00000488596	G3BP2	Q9UN86	482 aa	Known RBP	4.41	□□□□□ -1.7
CD46-215	ENST00000488596	KLRG2	A4D1S0	409 aa	Predicted RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	GABRD	O14764	452 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	KDM1A	O60341	852 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PRPF6	O94906	941 aa	Known RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PRL	P01236	227 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	LMO1	P25800	156 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	ADCY1	Q08828	1119 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	MYBPC3	Q14896	1274 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	TTC38	Q5R3I4	469 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	SYDE2	Q5VT97	1194 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PRAMEF9	Q5VWM5	478 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	C1QL3	Q5VWW1	255 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PHYKPL	Q8IUZ5	450 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	VRK3	Q8IV63	474 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	RAVER1	Q8IY67	606 aa	Known RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	CBARP	Q8N350	705 aa	Predicted RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	OR5AN1	Q8NGI8	311 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	HAS1	Q92839	578 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PGBD4	Q96DM1	585 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	MAML3	Q96JK9	1138 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	TCF25	Q9BQ70	676 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	TYW1	Q9NV66	732 aa	Known RBP	4.4	□□□□□ -1.71
CD46-215	ENST00000488596	TRPS1	Q9UHF7	1281 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	TNKS	O95271	1327 aa		4.4	□□□□□ -1.71
CD46-215	ENST00000488596	PRSS38	A1L453	326 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	ALDH1L1	O75891	902 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	MT-CO1	P00395	513 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	GC	P02774	474 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	MYBL2	P10244	700 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	NR4A1	P22736	598 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	PTGS2	P35354	604 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	ADRA1B	P35368	520 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	IARS	P41252	1262 aa	Known RBP	4.39	□□□□□ -1.71
CD46-215	ENST00000488596	GPR3	P46089	330 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	FAP	Q12884	760 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	DGKD	Q16760	1214 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	ABCB5	Q2M3G0	1257 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	RABL3	Q5HYI8	236 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	ZBTB41	Q5SVQ8	909 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	FKBP15	Q5T1M5	1219 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	TIGD7	Q6NT04	549 aa	Predicted RBP	4.39	□□□□□ -1.71
CD46-215	ENST00000488596	PGM2L1	Q6PCE3	622 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	RHOU	Q7L0Q8	258 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	NME9	Q86XW9	330 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	C7orf31	Q8N865	590 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	PLA2G15	Q8NCC3	412 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.39	□□□□□ -1.71
CD46-215	ENST00000488596	LMBR1	Q8WVP7	490 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.39	□□□□□ -1.71
CD46-215	ENST00000488596	EAF2	Q96CJ1	260 aa	Predicted RBP	4.39	□□□□□ -1.71
CD46-215	ENST00000488596	MNT	Q99583	582 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	MLST8	Q9BVC4	326 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	PRDM12	Q9H4Q4	367 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	IL23A	Q9NPF7	189 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	KLHL42	Q9P2K6	505 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	KCNG1	Q9UIX4	513 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	EDAR	Q9UNE0	448 aa		4.39	□□□□□ -1.71
CD46-215	ENST00000488596	GRXCR1	A8MXD5	290 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	TOX4	O94842	621 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	S100B	P04271	92 aa	Predicted RBP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	LPL	P06858	475 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	HMGB1	P09429	215 aa	Known RBP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	VSIG10L2	P0DP72	767 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	ROM1	Q03395	351 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	ADCY2	Q08462	1091 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	KLF1	Q13351	362 aa	Predicted RBP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	PTPN21	Q16825	1174 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	INAVA	Q3KP66	663 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	GAGE13	Q4V321	117 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	ODR4	Q5SWX8	454 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	SLFN12L	Q6IEE8	588 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	CCDC62	Q6P9F0	684 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	ESPNL	Q6ZVH7	1005 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	HTR3D	Q70Z44	454 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	CLEC14A	Q86T13	490 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	CXorf67	Q86X51	503 aa	Predicted RBP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	ZNF276	Q8N554	614 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	E2F7	Q96AV8	911 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	THRAP3	Q9Y2W1	955 aa	Known RBP	4.38	□□□□□ -1.71
CD46-215	ENST00000488596	PPP2R3B	Q9Y5P8	575 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596	WASHC2A	Q641Q2	1341 aa		4.38	□□□□□ -1.71
CD46-215	ENST00000488596		K7ESF4	209 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	PCDH8	O95206	1070 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	MANF	P55145	182 aa	Known RBP	4.37	□□□□□ -1.71
CD46-215	ENST00000488596	TTF1	Q15361	905 aa	Predicted RBP	4.37	□□□□□ -1.71
CD46-215	ENST00000488596	KANSL1	Q7Z3B3	1105 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	MB21D1	Q8N884	522 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.37	□□□□□ -1.71
CD46-215	ENST00000488596	FERMT2	Q96AC1	680 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	LENG9	Q96B70	501 aa		4.37	□□□□□ -1.71
CD46-215	ENST00000488596	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CD46-215	ENST00000488596	FAXDC2	Q96IV6	333 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms