RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
SNU13-208ENST00000488571 WRAP73Q9P2S5 460 aaPredicted RBP12.72□□□□□ -0.37
SNU13-208ENST00000488571 VAV3Q9UKW4 847 aa12.72□□□□□ -0.37
SNU13-208ENST00000488571 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
SNU13-208ENST00000488571 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
SNU13-208ENST00000488571 RIF1Q5UIP0 2472 aaKnown RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 PTPRZ1P23471 2315 aaPredicted RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 NRP1O14786 923 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 EFEMP2O95967 443 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 AOC1P19801 751 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 KLRC2P26717 231 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 TDGQ13569 410 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 LETM2Q2VYF4 491 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 C15orf39Q6ZRI6 1047 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 ACSF2Q96CM8 615 aaPredicted RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 AIFM3Q96NN9 605 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 TMEM175Q9BSA9 504 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 DHX33Q9H6R0 707 aaKnown RBP12.71□□□□□ -0.37
SNU13-208ENST00000488571 KCNK12Q9HB15 430 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 MARCH5Q9NX47 278 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
SNU13-208ENST00000488571 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
SNU13-208ENST00000488571 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 ALDH2P05091 517 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 QARSP47897 775 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 PPP2R5CQ13362 524 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 INF2Q27J81 1249 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 TAS1R1Q7RTX1 841 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 SRGAP1Q7Z6B7 1085 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 NKD2Q969F2 451 aaPredicted RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 TMEM143Q96AN5 459 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 KCNMB3Q9NPA1 279 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 MRPL17Q9NRX2 175 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 KANSL3Q9P2N6 904 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 DDX25Q9UHL0 483 aaKnown RBP12.7□□□□□ -0.38
SNU13-208ENST00000488571 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
SNU13-208ENST00000488571 TDRD15B5MCY1 1934 aaKnown RBP12.69□□□□□ -0.38
SNU13-208ENST00000488571 C2CD2LO14523 706 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 INPPL1O15357 1258 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
SNU13-208ENST00000488571 DEXIO95424 95 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 POMCP01189 267 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 SOD2P04179 222 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 SRGAP2CP0DJJ0 459 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
SNU13-208ENST00000488571 PSMA5P28066 241 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
SNU13-208ENST00000488571 LAMTOR4Q0VGL1 99 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNU13-208ENST00000488571 COLGALT2Q8IYK4 626 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 SIX5Q8N196 739 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
SNU13-208ENST00000488571 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 CEP170P1Q96L14 293 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 HERC2P3Q9BVR0 1158 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 MAN1C1Q9NR34 630 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 DOCK8Q8NF50 2099 aa12.69□□□□□ -0.38
SNU13-208ENST00000488571 GVINP1Q7Z2Y8 2422 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 KRBA1A5PL33 1030 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 F8W810 466 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 ZBTB39O15060 712 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 TEX28O15482 410 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 RFPL2O75678 378 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 PAPLNO95428 1278 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 URODP06132 367 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 AK2P54819 239 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 DSC1Q08554 894 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 ANGPT1Q15389 498 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 GALNT17Q6IS24 598 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 RUFY3Q7L099 469 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 FERMT3Q86UX7 667 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 DTWD2Q8NBA8 298 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
SNU13-208ENST00000488571 HAS1Q92839 578 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
SNU13-208ENST00000488571 FAM20AQ96MK3 541 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
SNU13-208ENST00000488571 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
SNU13-208ENST00000488571 RHOBTB2Q9BYZ6 727 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 RXFP1Q9HBX9 757 aa12.68□□□□□ -0.38
SNU13-208ENST00000488571 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms