RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 GBP3Q9H0R5 595 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 WDR6Q9NNW5 1121 aaKnown RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 MRPL17Q9NRX2 175 aaKnown RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 WRAP73Q9P2S5 460 aaPredicted RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
TTC3-221ENST00000488522 DPP7Q9UHL4 492 aa13.71□□□□□ -0.21
TTC3-221ENST00000488522 OTOGLQ3ZCN5 2332 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 TBX3O15119 743 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 ASAP2O43150 1006 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 ADH1AP07327 375 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 AXLP30530 894 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 NPEPPSP55786 919 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 LAMTOR4Q0VGL1 99 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 FRMD5Q7Z6J6 570 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 NXPE3Q969Y0 559 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 ZNF274Q96GC6 653 aaPredicted RBP13.7□□□□□ -0.22
TTC3-221ENST00000488522 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 WNT16Q9UBV4 365 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 DMXL1Q9Y485 3027 aa13.7□□□□□ -0.22
TTC3-221ENST00000488522 CLUHO75153 1309 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 TDRD15B5MCY1 1934 aaKnown RBP13.69□□□□□ -0.22
TTC3-221ENST00000488522 TEX28O15482 410 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 PI15O43692 258 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 URODP06132 367 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 DSG1Q02413 1049 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 KIAA0319Q5VV43 1072 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 RUFY3Q7L099 469 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 ERMP1Q7Z2K6 904 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 DTWD2Q8NBA8 298 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 TCP11Q8WWU5 503 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 STAMQ92783 540 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 CEP170P1Q96L14 293 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 TBC1D32Q96NH3 1257 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
TTC3-221ENST00000488522 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 GLUD1P00367 558 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 GLUD2P49448 558 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 EMC2Q15006 297 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 EPHA7Q15375 998 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 ANGPT1Q15389 498 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 AMHR2Q16671 573 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 INF2Q27J81 1249 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 SIX5Q8N196 739 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 HAS1Q92839 578 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
TTC3-221ENST00000488522 FAM193BQ96PV7 902 aaPredicted RBP13.68□□□□□ -0.22
TTC3-221ENST00000488522 LXNQ9BS40 222 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 SEMA4AQ9H3S1 761 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 IPPQ9Y573 584 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 FRYLO94915 3013 aa13.68□□□□□ -0.22
TTC3-221ENST00000488522 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 ARL5CA6NH57 179 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
TTC3-221ENST00000488522 TSPAN1O60635 241 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 LYPLA2O95372 231 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 POMCP01189 267 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
TTC3-221ENST00000488522 SRFP11831 508 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 ITGA4P13612 1032 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
TTC3-221ENST00000488522 PTENP60484 403 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 MXD4Q14582 209 aaPredicted RBP13.67□□□□□ -0.22
TTC3-221ENST00000488522 NOTUMQ6P988 496 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 TAS1R1Q7RTX1 841 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 NAP1L4Q99733 375 aaKnown RBP13.67□□□□□ -0.22
TTC3-221ENST00000488522 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
TTC3-221ENST00000488522 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
TTC3-221ENST00000488522 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms