RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ODF1Q14990 250 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 TBR1Q16650 682 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 PTPN21Q16825 1174 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 KIAA1841Q6NSI8 718 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 NME9Q86XW9 330 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ANKRD35Q8N283 1001 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 C1orf162Q8NEQ5 155 aaPredicted RBP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 FUBP3Q96I24 572 aaKnown RBP eCLIP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 ORAI2Q96SN7 254 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 BTBD2Q9BX70 525 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 QRSL1Q9H0R6 528 aaKnown RBP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 OR10A2Q9H208 303 aa3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 USP36Q9P275 1121 aaKnown RBP3.9□□□□□ -1.79
R3HDM1-219ENST00000488035 SLC26A4O43511 780 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 PCDH8O95206 1070 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 PFKMP08237 780 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 NEK2P51955 445 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 EIF4HQ15056 248 aaKnown RBP3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 LRRC41Q15345 812 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 FSCN1Q16658 493 aaKnown RBP3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 TOR2AQ5JU69 321 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 ZKSCAN2Q63HK3 967 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 ESPNLQ6ZVH7 1005 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 SLC41A1Q8IVJ1 513 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 GPR135Q8IZ08 494 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 JDP2Q8WYK2 163 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 FERMT2Q96AC1 680 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 HOOK2Q96ED9 719 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 ZNF764Q96H86 408 aaPredicted RBP3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 KIAA1683Q9H0B3 1180 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 KCTD10Q9H3F6 313 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 MTG2Q9H4K7 406 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 RIOX1Q9H6W3 641 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 ADARB2Q9NS39 739 aaKnown RBP3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 CDC42EP3Q9UKI2 254 aa3.89□□□□□ -1.79
R3HDM1-219ENST00000488035 A0A0A6YYK5 440 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 TRIM75PA6NK02 468 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 MASP2O00187 686 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 OPHN1O60890 802 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 PARNO95453 639 aaKnown RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 OSMP13725 252 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 APEX1P27695 318 aaKnown RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 RAB27AP51159 221 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 CCT2P78371 535 aaKnown RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 FAPQ12884 760 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 CNGB1Q14028 1251 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 TIGD7Q6NT04 549 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 PGM2L1Q6PCE3 622 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 KCNK18Q7Z418 384 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 RTKN2Q8IZC4 609 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 SHCBP1Q8NEM2 672 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 OR5AN1Q8NGI8 311 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 WDR48Q8TAF3 677 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 CALML6Q8TD86 181 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 TSPEARQ8WU66 669 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 HAS1Q92839 578 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 E2F7Q96AV8 911 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 FAXDC2Q96IV6 333 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 SLC2A13Q96QE2 648 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 SOX7Q9BT81 388 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 RTFDC1Q9BY42 306 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 PITHD1Q9GZP4 211 aaPredicted RBP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 NRDE2Q9H7Z3 1164 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 DNAJC28Q9NX36 388 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 DENND2AQ9ULE3 1009 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 WASHC2AQ641Q2 1341 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 MYPNQ86TC9 1320 aa3.88□□□□□ -1.79
R3HDM1-219ENST00000488035 A0A0A6YYJ9 748 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 SHTN1A0MZ66 631 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 AKAP10O43572 662 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 RBP3P10745 1247 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 MTNR1BP49286 362 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 MRE11P49959 708 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 STAT5BP51692 787 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 LGALS4P56470 323 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 PCOLCEQ15113 449 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 UGT8Q16880 541 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 SPTY2D1Q68D10 685 aaPredicted RBP3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 TMEM200BQ69YZ2 307 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 TRIM68Q6AZZ1 485 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 SYCE2Q6PIF2 218 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 LARP4Q71RC2 724 aaKnown RBP eCLIP3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 GAREM2Q75VX8 874 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 OTOP2Q7RTS6 562 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 GLCCI1Q86VQ1 547 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 JADE3Q92613 823 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 TSR2Q969E8 191 aaKnown RBP3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 CHMP4CQ96CF2 233 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 TMEM176AQ96HP8 235 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 ACAP3Q96P50 834 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 FDXACB1Q9BRP7 624 aaPredicted RBP3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 HAPLN2Q9GZV7 340 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 MKS1Q9NXB0 559 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 GPRC5BQ9NZH0 403 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 DPP7Q9UHL4 492 aa3.87□□□□□ -1.79
R3HDM1-219ENST00000488035 ZNHIT2Q9UHR6 403 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms