RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 GRXCR2A6NFK2 248 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 TBX10O75333 385 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 PRKCBP05771 671 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 SYT1P21579 422 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 SF3A1Q15459 793 aaKnown RBP22.57■■□□□ 1.2
HDAC4-209ENST00000487617 CLUL1Q15846 466 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 HYIQ5T013 277 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 TMC7Q7Z402 723 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 PNMA5Q96PV4 448 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 GAD1Q99259 594 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 KIFC3Q9BVG8 833 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 RUSC1Q9BVN2 902 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 NT5C3AQ9H0P0 336 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 NXF3Q9H4D5 531 aaKnown RBP22.57■■□□□ 1.2
HDAC4-209ENST00000487617 XIRP2A4UGR9 3374 aa22.57■■□□□ 1.2
HDAC4-209ENST00000487617 SPTBN5Q9NRC6 3674 aaKnown RBP22.56■■□□□ 1.2
HDAC4-209ENST00000487617 B4GALT3O60512 393 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 DDHD2O94830 711 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 SSBP05455 408 aaKnown RBP eCLIP22.56■■□□□ 1.2
HDAC4-209ENST00000487617 IL9P15248 144 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 MLH1P40692 756 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 SLC11A1P49279 550 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 PRPF4BQ13523 1007 aaKnown RBP22.56■■□□□ 1.2
HDAC4-209ENST00000487617 RINT1Q6NUQ1 792 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 CABP7Q86V35 215 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 TMEM173Q86WV6 379 aaPredicted RBP22.56■■□□□ 1.2
HDAC4-209ENST00000487617 IGSF21Q96ID5 467 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 AK8Q96MA6 479 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 CDCA3Q99618 268 aaPredicted RBP22.56■■□□□ 1.2
HDAC4-209ENST00000487617 CCDC113Q9H0I3 377 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 FAM50BQ9Y247 325 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 GIT1Q9Y2X7 761 aa22.56■■□□□ 1.2
HDAC4-209ENST00000487617 ARL5CA6NH57 179 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 TTLL13PA6NNM8 815 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 HIDE1A8MVS5 230 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 ACKR2O00590 384 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 N4BP3O15049 544 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 HIP1RO75146 1068 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 EFNA5P52803 228 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 RESTQ13127 1097 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 DUSP6Q16828 381 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 C1orf186Q6ZWK4 172 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 KCTD17Q8N5Z5 321 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 DRC1Q96MC2 740 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 TMEM175Q9BSA9 504 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 USP20Q9Y2K6 914 aa22.55■■□□□ 1.2
HDAC4-209ENST00000487617 FSD2A1L4K1 749 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 CCDC169A6NNP5 214 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 ALDH2P05091 517 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 AKAP5P24588 427 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 CA8P35219 290 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 UBA7P41226 1012 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 PEX3P56589 373 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 SMC1AQ14683 1233 aaKnown RBP22.54■■□□□ 1.2
HDAC4-209ENST00000487617 BMS1Q14692 1282 aaKnown RBP22.54■■□□□ 1.2
HDAC4-209ENST00000487617 DDX53Q86TM3 631 aaKnown RBP22.54■■□□□ 1.2
HDAC4-209ENST00000487617 VPS52Q8N1B4 723 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 BCL7CQ8WUZ0 217 aaPredicted RBP22.54■■□□□ 1.2
HDAC4-209ENST00000487617 SNX21Q969T3 373 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 ZFP42Q96MM3 310 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 PDZD7Q9H5P4 517 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 PARP2Q9UGN5 583 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 CD207Q9UJ71 328 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 FAN1Q9Y2M0 1017 aa22.54■■□□□ 1.2
HDAC4-209ENST00000487617 INPPL1O15357 1258 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 SLC26A4O43511 780 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 GLP2RO95838 553 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 NPTX2P47972 431 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 SCNN1GP51170 649 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 DMP1Q13316 513 aaPredicted RBP22.53■■□□□ 1.2
HDAC4-209ENST00000487617 TMEM119Q4V9L6 283 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 DAW1Q8N136 415 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 MRPL43Q8N983 215 aaKnown RBP22.53■■□□□ 1.2
HDAC4-209ENST00000487617 SYT2Q8N9I0 419 aaPredicted RBP22.53■■□□□ 1.2
HDAC4-209ENST00000487617 CALML4Q96GE6 196 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 ADPGKQ9BRR6 497 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 TIPINQ9BVW5 301 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 MIOSQ9NXC5 875 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 CLEC1BQ9P126 229 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 BARX2Q9UMQ3 279 aaPredicted RBP22.53■■□□□ 1.2
HDAC4-209ENST00000487617 CLIC4Q9Y696 253 aa22.53■■□□□ 1.2
HDAC4-209ENST00000487617 K7ERI5 159 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 CXCL14O95715 111 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 EDN1P05305 212 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 PLA2G4BP0C869 781 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 GUCY2CP25092 1073 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 LONP1P36776 959 aaKnown RBP22.52■■□□□ 1.2
HDAC4-209ENST00000487617 RBM10P98175 930 aaKnown RBP22.52■■□□□ 1.2
HDAC4-209ENST00000487617 GRIN1Q05586 938 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 MAPK7Q13164 816 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 FAM178BQ8IXR5 827 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 VN1R2Q8NFZ6 395 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 MSLNLQ96KJ4 702 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 KMT5AQ9NQR1 393 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 KLK14Q9P0G3 267 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 MTMR6Q9Y217 621 aa22.52■■□□□ 1.2
HDAC4-209ENST00000487617 C2orf71A6NGG8 1288 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 SFI1A8K8P3 1242 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 NRP1O14786 923 aa22.51■■□□□ 1.19
HDAC4-209ENST00000487617 MBTPS2O43462 519 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms