RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 ARL6IP4Q66PJ3 421 aaKnown RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 SLC27A1Q6PCB7 646 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 KCNK18Q7Z418 384 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 DEPTORQ8TB45 409 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 KIFAP3Q92845 792 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 IGSF21Q96ID5 467 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 GAD1Q99259 594 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 TRIM6Q9C030 488 aaPredicted RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 CCDC113Q9H0I3 377 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 C2orf40Q9H1Z8 148 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 NXF3Q9H4D5 531 aaKnown RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
SPEN-205ENST00000487496 BARX2Q9UMQ3 279 aaPredicted RBP12.66□□□□□ -0.38
SPEN-205ENST00000487496 MUC3AQ02505 3323 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 ARL5CA6NH57 179 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 ACKR2O00590 384 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 MBTPS2O43462 519 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 NPTXRO95502 500 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 ALDH2P05091 517 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 MLH1P40692 756 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 COASYQ13057 564 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 KCNC3Q14003 757 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 ZRSR1Q15695 479 aaKnown RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 MAPK6Q16659 721 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 HYIQ5T013 277 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 HACE1Q8IYU2 909 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 GJD3Q8N144 294 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 VPS52Q8N1B4 723 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
SPEN-205ENST00000487496 TMEM175Q9BSA9 504 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 KIFC3Q9BVG8 833 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 MIOSQ9NXC5 875 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 USP20Q9Y2K6 914 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
SPEN-205ENST00000487496 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
SPEN-205ENST00000487496 NRP1O14786 923 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 CXCL14O95715 111 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 EDN1P05305 212 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 PRKCBP05771 671 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 LIG1P18858 919 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 PDCP20941 246 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 AKAP5P24588 427 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 SCNN1GP51170 649 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
SPEN-205ENST00000487496 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
SPEN-205ENST00000487496 RINT1Q6NUQ1 792 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 C1orf186Q6ZWK4 172 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 COLGALT2Q8IYK4 626 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 DAW1Q8N136 415 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 GSTCDQ8NEC7 633 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
SPEN-205ENST00000487496 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 RUSC1Q9BVN2 902 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 PDZD7Q9H5P4 517 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
SPEN-205ENST00000487496 BDP1A6H8Y1 2624 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 N4BP3O15049 544 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 HIP1RO75146 1068 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 BMP15O95972 392 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 CTSAP10619 480 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
SPEN-205ENST00000487496 NPTX2P47972 431 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 EFNA5P52803 228 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 PEX3P56589 373 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 ZP2Q05996 745 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 DSC1Q08554 894 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 SF3A1Q15459 793 aaKnown RBP12.63□□□□□ -0.39
SPEN-205ENST00000487496 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 ADHFE1Q8IWW8 467 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 AUTS2Q8WXX7 1259 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPEN-205ENST00000487496 PLIN2Q99541 437 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 NT5C3AQ9H0P0 336 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 PARP2Q9UGN5 583 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
SPEN-205ENST00000487496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.62□□□□□ -0.39
SPEN-205ENST00000487496 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms