RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ATF7IP2Q5U623 682 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ANKRD40Q6AI12 368 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 LRRC55Q6ZSA7 311 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 HS2ST1Q7LGA3 356 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 CATSPER4Q7RTX7 472 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 ENOX1Q8TC92 643 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 DUSP9Q99956 384 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 CBWD1Q9BRT8 395 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 TARS2Q9BW92 718 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 HAPLN2Q9GZV7 340 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 NAT10Q9H0A0 1025 aaKnown RBP10.49□□□□□ -0.73
MCF2L-227ENST00000486806 PDZD7Q9H5P4 517 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 TNFSF13BQ9Y275 285 aa10.49□□□□□ -0.73
MCF2L-227ENST00000486806 A0A0B4J269 797 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 IKBKBO14920 756 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 GPR182O15218 404 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-227ENST00000486806 TIMP1P01033 207 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 NR3C1P04150 777 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 GARTP22102 1010 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CD52P31358 61 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CYP2C18P33260 490 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 STX17P56962 302 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 MYL5Q02045 173 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 MCL1Q07820 350 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 PAK2Q13177 524 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 MYBPC2Q14324 1141 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 NOLC1Q14978 699 aaKnown RBP eCLIP10.48□□□□□ -0.73
MCF2L-227ENST00000486806 EEF1DP3Q658K8 133 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 MPZL3Q6UWV2 235 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 GAS2L3Q86XJ1 694 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 SYCP3Q8IZU3 236 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 AOPEPQ8N6M6 819 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 BICD1Q96G01 975 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 SCLYQ96I15 445 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CPB2Q96IY4 423 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 TSG101Q99816 390 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 IFIH1Q9BYX4 1025 aaKnown RBP10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CDT1Q9H211 546 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 HSD3B7Q9H2F3 369 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 TMX1Q9H3N1 280 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 ANKFY1Q9P2R3 1169 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 PADI3Q9ULW8 664 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 ST3GAL5Q9UNP4 418 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 PIN4Q9Y237 131 aaKnown RBP10.48□□□□□ -0.73
MCF2L-227ENST00000486806 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 MYH11P35749 1972 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 KAT6AQ92794 2004 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 EVPLQ92817 2033 aa10.48□□□□□ -0.73
MCF2L-227ENST00000486806 N4BP3O15049 544 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 MGEA5O60502 916 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 NR2F2P24468 414 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 RFC2P35250 354 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 CCL23P55773 120 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 FKBP3Q00688 224 aaKnown RBP10.47□□□□□ -0.73
MCF2L-227ENST00000486806 DSC3Q14574 896 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 ZNF568Q3ZCX4 644 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 UBXN11Q5T124 520 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 ARMCX5Q6P1M9 558 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 SLC27A1Q6PCB7 646 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 FAM43BQ6ZT52 329 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-227ENST00000486806 LINC01599Q8WXQ3 324 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 ZBTB45Q96K62 511 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-227ENST00000486806 FBXL18Q96ME1 805 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 HTATIP2Q9BUP3 242 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-227ENST00000486806 CHST12Q9NRB3 414 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 HSPBP1Q9NZL4 362 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 NFE2L3Q9Y4A8 694 aa10.47□□□□□ -0.73
MCF2L-227ENST00000486806 KIAA0391O15091 583 aaKnown RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CLIC2O15247 247 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 SLC16A3O15427 465 aaKnown RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CLDN3O15551 220 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 MCF2P10911 925 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 ZNF18P17022 549 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 TCTN1Q2MV58 587 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 DCAF4L1Q3SXM0 396 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 SLFN12LQ6IEE8 588 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 MFSD5Q6N075 450 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 LUZP1Q86V48 1076 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CDR2LQ86X02 465 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-227ENST00000486806 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 ZSWIM2Q8NEG5 633 aa10.46□□□□□ -0.73
MCF2L-227ENST00000486806 POMGNT1Q8WZA1 660 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms