RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZSCAN20P17040 1043 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 PBX1P40424 430 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 IFRD2Q12894 506 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 EMC2Q15006 297 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 HEXIM2Q96MH2 286 aaKnown RBP14.19□□□□□ -0.14
HMGN1-216ENST00000486741 PARP2Q9UGN5 583 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 NID2Q14112 1375 aa14.19□□□□□ -0.14
HMGN1-216ENST00000486741 ITGB5P18084 799 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 GNA15P30679 374 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 POLR2BP30876 1174 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 BEND6Q5SZJ8 279 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CCDC91Q7Z6B0 441 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CTAGE3PQ8IX95 158 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ETNPPLQ8TBG4 499 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 SLC20A1Q8WUM9 679 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 AGO4Q9HCK5 861 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ACP6Q9NPH0 428 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 TTC7AQ9ULT0 858 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 REXO2Q9Y3B8 237 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 TTLL3Q9Y4R7 772 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CCDC188H7C350 402 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CSDE1O75534 798 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 FDX1P10109 184 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 KCNJ1P48048 391 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 JAG1P78504 1218 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 RSRC2Q7L4I2 434 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 DHX38Q92620 1227 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 RNF34Q969K3 372 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ZNF446Q9NWS9 450 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ASTN2O75129 1339 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 PI4K2BG5E9Z4 385 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 PEX10O60683 326 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CNTN2Q02246 1040 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 WHAMMQ8TF30 809 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 MAIP1Q8WWC4 291 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 PXMP2Q9NR77 195 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 HESX1Q9UBX0 185 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ATP9AO75110 1047 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 NR1D1P20393 614 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 SCP2P22307 547 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 YWHAEP62258 255 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 KRT81Q14533 505 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 PGM5Q15124 567 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CLUL1Q15846 466 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 HADHQ16836 314 aaKnown RBP14.18□□□□□ -0.14
HMGN1-216ENST00000486741 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 MMP19Q99542 508 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 PCSK1NQ9UHG2 260 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
HMGN1-216ENST00000486741 SGPL1O95470 568 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 SLC8A3P57103 927 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 ZBTB16Q05516 673 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 ZNF699Q32M78 642 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 B4GALNT4Q76KP1 1039 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 MRPL47Q9HD33 250 aaKnown RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 KCND2Q9NZV8 630 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 PDE2AO00408 941 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 VWA5AO00534 786 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 SASH3O75995 380 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 CBWD6Q4V339 395 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 CBWD3Q5JTY5 395 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 CBWD5Q5RIA9 395 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 ZRANB2O95218 330 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■□□□ 12.1
HMGN1-216ENST00000486741 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 CIITAP33076 1130 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 TMEM62Q0P6H9 643 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 TTC31Q49AM3 519 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 ZNF667Q5HYK9 610 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 PAPD7Q5XG87 772 aaKnown RBP14.17□□□□□ -0.14
HMGN1-216ENST00000486741 TAS1R2Q8TE23 839 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 LRRC15Q8TF66 581 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 SLC5A5Q92911 643 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 MKNK1Q9BUB5 465 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 MRIQ9BWK5 157 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 ANAPC5Q9UJX4 755 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 FBXL5Q9UKA1 691 aa14.17□□□□□ -0.14
HMGN1-216ENST00000486741 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 PSMD10O75832 226 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 MEA1Q16626 185 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 GLE1Q53GS7 698 aaKnown RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 JPH2Q9BR39 696 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 OLFML3Q9NRN5 406 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 TRAF3IP3Q9Y228 551 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 SPEF2Q9C093 1822 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 H7C0C1 242 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 CALCAP01258 141 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 ATP5OP48047 213 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 ZKSCAN8Q15776 578 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms