RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PDCD11Q14690 1871 aaKnown RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ACKR2O00590 384 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 CBFA2T2O43439 604 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 B4GALT4O60513 344 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 AKAP3O75969 853 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 COL6A1P12109 1028 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 DARSP14868 501 aaKnown RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 GARTP22102 1010 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PROZP22891 400 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 CASP4P49662 377 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 TERF1P54274 439 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 GSDMDP57764 484 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 SPAG1Q07617 926 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 RBL2Q08999 1139 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 TMEM62Q0P6H9 643 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PTK7Q13308 1070 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ADAM9Q13443 819 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 SNX17Q15036 470 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PTGISQ16647 500 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 MAPK6Q16659 721 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 KIZQ2M2Z5 673 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 TCP11X2Q5H9J9 407 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 HS2ST1Q7LGA3 356 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ZSWIM2Q8NEG5 633 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 CNOT6LQ96LI5 555 aaKnown RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 FBXL18Q96ME1 805 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ACO2Q99798 780 aaKnown RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 MKNK1Q9BUB5 465 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 SEZ6LQ9BYH1 1024 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PTPRHQ9HD43 1115 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
SND1-212ENST00000485871 IMPACTQ9P2X3 320 aa12.38□□□□□ -0.43
SND1-212ENST00000485871 ALPK3Q96L96 1907 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 CETN3O15182 167 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 SLC16A3O15427 465 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 B4GALT5O43286 388 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 FAM189A1O60320 539 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 CSDE1O75534 798 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 OFD1O75665 1012 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 CD4P01730 458 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 MRPS6P82932 125 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 STRN3Q13033 797 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 KRT31Q15323 416 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 MIIPQ5JXC2 388 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 ARMCX5Q6P1M9 558 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 UBE2Q1Q7Z7E8 422 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 TRIM59Q8IWR1 403 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 FAM126BQ8IXS8 530 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 PRIMPOLQ96LW4 560 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 OSMRQ99650 979 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 MRPL4Q9BYD3 311 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 CELF4Q9BZC1 486 aaKnown RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
SND1-212ENST00000485871 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 TRPV2Q9Y5S1 764 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 TRIP11Q15643 1979 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 CITO14578 2027 aa12.37□□□□□ -0.43
SND1-212ENST00000485871 A0A0B4J269 797 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 A0A1B0GTH6 734 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 MAPK13O15264 365 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 NRDCO43847 1150 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 TSPAN1O60635 241 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 CAND2O75155 1236 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 GNA14O95837 355 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 CHRNA1P02708 482 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 LIG4P49917 911 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 COPB1P53618 953 aaKnown RBP12.36□□□□□ -0.43
SND1-212ENST00000485871 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
SND1-212ENST00000485871 FAM26DQ5JW98 314 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 EEF1DP3Q658K8 133 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 TSHZ1Q6ZSZ6 1077 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 FAM114A1Q8IWE2 563 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 ANKLE1Q8NAG6 615 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 DIS3LQ8TF46 1054 aaKnown RBP12.36□□□□□ -0.43
SND1-212ENST00000485871 VTI1AQ96AJ9 217 aa12.36□□□□□ -0.43
SND1-212ENST00000485871 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
SND1-212ENST00000485871 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms