RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NAPGQ99747 312 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 RNPEPQ9H4A4 650 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 SUGCTQ9HAC7 445 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 CGNQ9P2M7 1197 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 APEX2Q9UBZ4 518 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 DNAJC12Q9UKB3 198 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC45A1Q9Y2W3 748 aa9.61□□□□□ -0.87
CDC42SE1-204ENST00000483763 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 LRRIQ3A6PVS8 624 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAFO75444 373 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 LGR5O75473 907 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 TADA3O75528 432 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MOCS3O95396 460 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MCCD1P59942 119 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 SNRPFP62306 86 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 CAPSQ13938 189 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 EPC2Q52LR7 807 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZBTB41Q5SVQ8 909 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARHGEF19Q8IW93 802 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 SEMA4DQ92854 862 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 FAM213AQ9BRX8 229 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 AZI2Q9H6S1 392 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 NRBP2Q9NSY0 501 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MORF4L1Q9UBU8 362 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 CDC23Q9UJX2 597 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 EXOC7Q9UPT5 735 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 FOXN3O00409 490 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAPK13O15264 365 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 EVI5O60447 810 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 SNAI1O95863 264 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLC10A3P09131 477 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 NAMPTP43490 491 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ACOT2P49753 483 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 CCNA1P78396 465 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAP2K1Q02750 393 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARHGAP1Q07960 439 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 PLCB4Q15147 1175 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 KCNV1Q6PIU1 500 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 GPR142Q7Z601 462 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 HVCN1Q96D96 273 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 BICD1Q96G01 975 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 MFSD14AQ96MC6 490 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 TARS2Q9BW92 718 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 STK33Q9BYT3 514 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 RNF186Q9NXI6 227 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 KCNG1Q9UIX4 513 aa9.6□□□□□ -0.87
CDC42SE1-204ENST00000483763 ASB14A6NK59 587 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 K7ERI5 159 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PJA2O43164 708 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ADCY6O43306 1168 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 BUB1O43683 1085 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 DLATP10515 647 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 KLRC1P26715 233 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ADCYAP1R1P41586 468 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PRKCIP41743 596 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 TTLL4Q14679 1199 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARHGAP44Q17R89 818 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SEZ6Q53EL9 994 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 FAM160B1Q5W0V3 765 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 CRELD2Q6UXH1 353 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 TAS1R2Q8TE23 839 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ATP8B4Q8TF62 1192 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SCFD2Q8WU76 684 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PARK7Q99497 189 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 MPHOSPH6Q99547 160 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 UBE2TQ9NPD8 197 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 MYO6Q9UM54 1294 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 IGKV6-21A0A0C4DH24 114 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 IGF2BP3O00425 579 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 DDX3XO00571 662 aaKnown RBP eCLIP9.59□□□□□ -0.872e-8■■□□□ 12.9
CDC42SE1-204ENST00000483763 ZNF185O15231 689 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SRGAP2CP0DJJ0 459 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SOX5P35711 763 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 GCLCP48506 637 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 MXI1P50539 228 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 NLRP11P59045 1033 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 LMBRD2Q68DH5 695 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PLPPR4Q7Z2D5 763 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 TRAPPC11Q7Z392 1133 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 PALB2Q86YC2 1186 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 MNS1Q8NEH6 495 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 DEPTORQ8TB45 409 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 SYT11Q9BT88 431 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 NENFQ9UMX5 172 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 DIS3Q9Y2L1 958 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 STYXL1Q9Y6J8 313 aa9.59□□□□□ -0.87
CDC42SE1-204ENST00000483763 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms