RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	ALG13	Q9NP73	1137 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ARHGAP28	Q9P2N2	729 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	LZTS1	Q9Y250	596 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	GIT1	Q9Y2X7	761 aa		13.62	□□□□□ -0.23
MRPL55-229	ENST00000483159	ZMYM2	Q9UBW7	1377 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	MEIS3P2	A8K0S8	358 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	SFI1	A8K8P3	1242 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	FGF18	O76093	207 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	BRD1	O95696	1058 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	ZNF131	P52739	623 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	KRT17	Q04695	432 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	RAD51AP2	Q09MP3	1159 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	MCM6	Q14566	821 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	TMEM132A	Q24JP5	1023 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	LONRF3	Q496Y0	759 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	PDE12	Q6L8Q7	609 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	THNSL1	Q8IYQ7	743 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	LRRC15	Q8TF66	581 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	KIFC3	Q9BVG8	833 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	PDZD7	Q9H5P4	517 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	NSUN3	Q9H649	340 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	TBC1D13	Q9NVG8	400 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	SPG21	Q9NZD8	308 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	PUF60	Q9UHX1	559 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	RCOR1	Q9UKL0	485 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	COG5	Q9UP83	839 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	TNFSF13B	Q9Y275	285 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	EYS	Q5T1H1	3165 aa		13.61	□□□□□ -0.23
MRPL55-229	ENST00000483159	ARL5C	A6NH57	179 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	TTLL13P	A6NNM8	815 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	NCK2	O43639	380 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	NPTXR	O95502	500 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	KRT18	P05783	430 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	ABCD1	P33897	745 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	BCAR1	P56945	870 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	RNASEL	Q05823	741 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	CAMK1	Q14012	370 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	GIT2	Q14161	759 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	DHX8	Q14562	1220 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	DCAF4L1	Q3SXM0	396 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	NT5DC1	Q5TFE4	455 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	ATF7IP2	Q5U623	682 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	SV2B	Q7L1I2	683 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	TMEM161B	Q8NDZ6	487 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	POF1B	Q8WVV4	589 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	REEP2	Q9BRK0	252 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	MRPL4	Q9BYD3	311 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	HCST	Q9UBK5	93 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	INPP5F	Q9Y2H2	1132 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	ZDHHC9	Q9Y397	364 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	HES2	Q9Y543	173 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	ATP6V1D	Q9Y5K8	247 aa		13.6	□□□□□ -0.23
MRPL55-229	ENST00000483159	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	SLC16A4	O15374	487 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	FAM13A	O94988	1023 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	ALDH2	P05091	517 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	MAPT	P10636	758 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	LIG1	P18858	919 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	DNAJB1	P25685	340 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	NCKAP1L	P55160	1127 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	STRN3	Q13033	797 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	SKIV2L	Q15477	1246 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	CDR2L	Q86X02	465 aa	Predicted RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	SLC39A11	Q8N1S5	342 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	MYCT1	Q8N699	235 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	MRPS27	Q92552	414 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	HLA-C	Q95604	372 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	PPP2R3C	Q969Q6	453 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	ACO2	Q99798	780 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	TMEM175	Q9BSA9	504 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	CUEDC2	Q9H467	287 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	NXF3	Q9H4D5	531 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	NRDE2	Q9H7Z3	1164 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	PARVG	Q9HBI0	331 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	THEG	Q9P2T0	379 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	STK39	Q9UEW8	545 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	RALGAPA2	Q2PPJ7	1873 aa		13.59	□□□□□ -0.23
MRPL55-229	ENST00000483159	TRAK2	O60296	914 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	TBCA	O75347	108 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	EDN1	P05305	212 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	GALT	P07902	379 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	AKAP5	P24588	427 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	MLH1	P40692	756 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	STAT6	P42226	847 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	ME1	P48163	572 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	AFF1	P51825	1210 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	DNM1	Q05193	864 aa	Known RBP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	COL19A1	Q14993	1142 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	AAK1	Q2M2I8	961 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	ZPBP2	Q6X784	338 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	TAS1R3	Q7RTX0	852 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	HAUS6	Q7Z4H7	955 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	ZNF280B	Q86YH2	543 aa		13.58	□□□□□ -0.24
MRPL55-229	ENST00000483159	FAM193B	Q96PV7	902 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms