RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 RBM23Q86U06 439 aaKnown RBP16.35■□□□□ 0.21
OPTN-210ENST00000482140 TCF25Q9BQ70 676 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 KIFC3Q9BVG8 833 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 RUSC1Q9BVN2 902 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 FZD8Q9H461 694 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
OPTN-210ENST00000482140 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
OPTN-210ENST00000482140 TLE6Q9H808 572 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 HES2Q9Y543 173 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 CLIC4Q9Y696 253 aa16.35■□□□□ 0.21
OPTN-210ENST00000482140 H3BQ06 376 aaPredicted RBP16.34■□□□□ 0.21
OPTN-210ENST00000482140 ACKR2O00590 384 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 POMCP01189 267 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
OPTN-210ENST00000482140 MLH1P40692 756 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
OPTN-210ENST00000482140 TMEM119Q4V9L6 283 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 C1orf186Q6ZWK4 172 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 TMC7Q7Z402 723 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
OPTN-210ENST00000482140 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
OPTN-210ENST00000482140 KMT5AQ9NQR1 393 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 GIT1Q9Y2X7 761 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
OPTN-210ENST00000482140 SPTBN5Q9NRC6 3674 aaKnown RBP16.34■□□□□ 0.21
OPTN-210ENST00000482140 A0A0C4DFX4 3053 aa16.33■□□□□ 0.21
OPTN-210ENST00000482140 FSD2A1L4K1 749 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 ARL5CA6NH57 179 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 K7ERI5 159 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 FSCN2O14926 492 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 GALTP07902 379 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 GUCY2CP25092 1073 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
OPTN-210ENST00000482140 NDUFV1P49821 464 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 PUS10Q3MIT2 529 aaKnown RBP16.33■□□□□ 0.2
OPTN-210ENST00000482140 FAM173BQ6P4H8 233 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 APBB1IPQ7Z5R6 666 aaPredicted RBP16.33■□□□□ 0.2
OPTN-210ENST00000482140 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 GAD1Q99259 594 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 PDZD7Q9H5P4 517 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 C17orf75Q9HAS0 396 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 KCND2Q9NZV8 630 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 FAM50BQ9Y247 325 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 MYH15Q9Y2K3 1946 aa16.33■□□□□ 0.2
OPTN-210ENST00000482140 LINC01565O15544 149 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 DDHD2O94830 711 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 ALDH2P05091 517 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 AKAP5P24588 427 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 NPTX2P47972 431 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 SLC11A1P49279 550 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 SCNN1GP51170 649 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 GRIN1Q05586 938 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 ADAM15Q13444 863 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 DHX8Q14562 1220 aaKnown RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 KARSQ15046 597 aaKnown RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 CTC1Q2NKJ3 1217 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 PTCRAQ6ISU1 281 aaPredicted RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 DAW1Q8N136 415 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 IGSF21Q96ID5 467 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 CDCA3Q99618 268 aaPredicted RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 TMEM175Q9BSA9 504 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 KCNG1Q9UIX4 513 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 FAN1Q9Y2M0 1017 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
OPTN-210ENST00000482140 CUL9Q8IWT3 2517 aa16.32■□□□□ 0.2
OPTN-210ENST00000482140 TTLL13PA6NNM8 815 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 PER2O15055 1255 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 NR1I2O75469 434 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 SRGAP2BP0DMP2 458 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
OPTN-210ENST00000482140 PLCG1P19174 1290 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 TXLNAP40222 546 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 OR1G1P47890 313 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
OPTN-210ENST00000482140 SMTNP53814 917 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 MAPK7Q13164 816 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 PTPAQ15257 358 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 CLUL1Q15846 466 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 DCAF4L1Q3SXM0 396 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 VPS52Q8N1B4 723 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms