RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 DDX53Q86TM3 631 aaKnown RBP16.61■□□□□ 0.25
TDP2-205ENST00000480495 ZNF280BQ86YH2 543 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 GJD3Q8N144 294 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 KCTD17Q8N5Z5 321 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 MRPL43Q8N983 215 aaKnown RBP16.61■□□□□ 0.25
TDP2-205ENST00000480495 DEPTORQ8TB45 409 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 GBP3Q9H0R5 595 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 GIT1Q9Y2X7 761 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 ZMYM2Q9UBW7 1377 aa16.61■□□□□ 0.25
TDP2-205ENST00000480495 ARL5CA6NH57 179 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 PP2D1A8MPX8 630 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 HIDE1A8MVS5 230 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 ALDH2P05091 517 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 PDCP20941 246 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 SLC11A1P49279 550 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 EFNA5P52803 228 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 TMEM184AQ6ZMB5 413 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 ADHFE1Q8IWW8 467 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 VPS52Q8N1B4 723 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 SMRP1Q8NCR6 262 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
TDP2-205ENST00000480495 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 DNAJB4Q9UDY4 337 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
TDP2-205ENST00000480495 HES2Q9Y543 173 aa16.6■□□□□ 0.25
TDP2-205ENST00000480495 C2orf71A6NGG8 1288 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 E9PMD0 336 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 N4BP3O15049 544 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 DDHD2O94830 711 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 NPTXRO95502 500 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 BMP15O95972 392 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 POMCP01189 267 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 PRKCBP05771 671 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 CDC25AP30304 524 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 SSTR3P32745 418 aaPredicted RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 ZP2Q05996 745 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 KCNC3Q14003 757 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 GIT2Q14161 759 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 HYIQ5T013 277 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 TMEM173Q86WV6 379 aaPredicted RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 GAD1Q99259 594 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 POP1Q99575 1024 aaKnown RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 NT5C3AQ9H0P0 336 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 ZBP1Q9H171 429 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
TDP2-205ENST00000480495 CD320Q9NPF0 282 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 FAN1Q9Y2M0 1017 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 IRAK3Q9Y616 596 aa16.59■□□□□ 0.25
TDP2-205ENST00000480495 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 ACKR2O00590 384 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 SLC26A4O43511 780 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 B4GALT3O60512 393 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 CXCL14O95715 111 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 CTSAP10619 480 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 MLH1P40692 756 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 CDR2LQ86X02 465 aaPredicted RBP16.58■□□□□ 0.24
TDP2-205ENST00000480495 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 BCL7CQ8WUZ0 217 aaPredicted RBP16.58■□□□□ 0.24
TDP2-205ENST00000480495 AK8Q96MA6 479 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 DRC1Q96MC2 740 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 TIPINQ9BVW5 301 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 C1QTNF1Q9BXJ1 281 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 MUC3AQ02505 3323 aa16.58■□□□□ 0.24
TDP2-205ENST00000480495 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 NRP1O14786 923 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 NR1I2O75469 434 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 HOXB8P17481 243 aaPredicted RBP16.57■□□□□ 0.24
TDP2-205ENST00000480495 SCNN1GP51170 649 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 DSC1Q08554 894 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 RINT1Q6NUQ1 792 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 COLGALT2Q8IYK4 626 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 CASP10Q92851 521 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 INTS4Q96HW7 963 aaKnown RBP16.57■□□□□ 0.24
TDP2-205ENST00000480495 ZFP42Q96MM3 310 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 ADPGKQ9BRR6 497 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 PDZD7Q9H5P4 517 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 C17orf75Q9HAS0 396 aa16.57■□□□□ 0.24
TDP2-205ENST00000480495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.56■□□□□ 0.24
TDP2-205ENST00000480495 VPS37CA5D8V6 355 aaPredicted RBP16.56■□□□□ 0.24
TDP2-205ENST00000480495 HIP1RO75146 1068 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 AKAP5P24588 427 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 CA8P35219 290 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 RBM10P98175 930 aaKnown RBP16.56■□□□□ 0.24
TDP2-205ENST00000480495 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
TDP2-205ENST00000480495 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 C1orf186Q6ZWK4 172 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 KCNK18Q7Z418 384 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
TDP2-205ENST00000480495 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 POLD4Q9HCU8 107 aa16.56■□□□□ 0.24
TDP2-205ENST00000480495 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms