RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 STAT1P42224 750 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 SFSWAPQ12872 951 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 ZNF211Q13398 564 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 LSAMPQ13449 338 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ZC3H18Q86VM9 953 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 SNX29Q8TEQ0 813 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 NRG4Q8WWG1 115 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 SYT11Q9BT88 431 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 MIS12Q9H081 205 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 KANSL2Q9H9L4 492 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 MLXIPLQ9NP71 852 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 AAASQ9NRG9 546 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 ARPP21Q9UBL0 812 aaPredicted RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 ZNF212Q9UDV6 495 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 CIDEBQ9UHD4 219 aa11.41□□□□□ -0.58
SIK3-210ENST00000480468 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.41□□□□□ -0.58
SIK3-210ENST00000480468 ESYT2A0FGR8 921 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 FAM47DPA6NHR8 397 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 HGSO14964 777 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 FAM163BP0C2L3 166 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 MCL1Q07820 350 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 USP4Q13107 963 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 RHBDF2Q6PJF5 856 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 KCNK18Q7Z418 384 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 RHOT2Q8IXI1 618 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 RIBC1Q8N443 379 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 TBCKQ8TEA7 893 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ZNF184Q99676 751 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 MMADHCQ9H3L0 296 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 UBN1Q9NPG3 1134 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 PHTF1Q9UMS5 762 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 TBC1D30Q9Y2I9 924 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 MAP3K7O43318 606 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 SLC26A4O43511 780 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ZWINTO95229 277 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ACSL3O95573 720 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ASMTLO95671 621 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 NAPAP54920 295 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 CDR2Q01850 454 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 NR1H3Q13133 447 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 RCN1Q15293 331 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 HYIQ5T013 277 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 CCNJLQ8IV13 435 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 MORC4Q8TE76 937 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 C10orf82Q8WW14 230 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 OLFM3Q96PB7 478 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ORAI2Q96SN7 254 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 ZSWIM1Q9BR11 485 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 CENPKQ9BS16 269 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 SUDS3Q9H7L9 328 aaPredicted RBP11.4□□□□□ -0.58
SIK3-210ENST00000480468 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 TRAF3IP3Q9Y228 551 aa11.4□□□□□ -0.58
SIK3-210ENST00000480468 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 KIAA1551Q9HCM1 1747 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ANKRD62A6NC57 917 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ANKRD63C9JTQ0 380 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SNAP23O00161 211 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 C2CD2LO14523 706 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 CCDC22O60826 627 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 EDF1O60869 148 aaKnown RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 PSMG1O95456 288 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 LYNP07948 512 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 ITIH2P19823 946 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 NR2F2P24468 414 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 CAV1Q03135 178 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 MTA1Q13330 715 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SH2D4BQ5SQS7 431 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ACBD5Q5T8D3 534 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 DAB2IPQ5VWQ8 1189 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ZDHHC14Q8IZN3 488 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SYNCQ9H7C4 482 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
SIK3-210ENST00000480468 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 EURLQ9NYK6 297 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 TP73O15350 636 aa11.39□□□□□ -0.59
SIK3-210ENST00000480468 SLC16A3O15427 465 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms