RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TMEM237Q96Q45 408 aa11.67□□□□□ -0.54
CHD6-208ENST00000480022 IQCGQ9H095 443 aaKnown RBP11.67□□□□□ -0.54
CHD6-208ENST00000480022 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SCN4AP35499 1836 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SIGLEC16A6NMB1 481 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 NPM3O75607 178 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 MCM7P33993 719 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SFMBT2Q5VUG0 894 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 INTS8Q75QN2 995 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 ZNF654Q8IZM8 581 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 CFAP61Q8NHU2 1237 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 MGARPQ8TDB4 240 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 LRRC8CQ8TDW0 803 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 SLX1AQ9BQ83 275 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 RMI1Q9H9A7 625 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 PFDN1O60925 122 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 PRDM1O75626 825 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 RASA1P20936 1047 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 YY1P25490 414 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SH3BGRP55822 239 aaPredicted RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 DEUP1Q05D60 604 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 SLC29A2Q14542 456 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 PKN1Q16512 942 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 CEP128Q6ZU80 1094 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 ZC3H18Q86VM9 953 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 METTL13Q8N6R0 699 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 ANKLE1Q8NAG6 615 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 TRIM51Q9BSJ1 452 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 NACAP1Q9BZK3 213 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 RPL26L1Q9UNX3 145 aaKnown RBP11.66□□□□□ -0.54
CHD6-208ENST00000480022 USP20Q9Y2K6 914 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 MYH4Q9Y623 1939 aa11.66□□□□□ -0.54
CHD6-208ENST00000480022 ENTPD3O75355 529 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 TMCC1O94876 653 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 USP46P62068 366 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 OCRLQ01968 901 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 MGAT5Q09328 741 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 ALX1Q15699 326 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 CCDC6Q16204 474 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 VSIG1Q86XK7 387 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 APOBEC3FQ8IUX4 373 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 SYN2Q92777 582 aaPredicted RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 GATA6Q92908 595 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD6-208ENST00000480022 TMEM109Q9BVC6 243 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 YIPF2Q9BWQ6 316 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 PACSIN1Q9BY11 444 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 MCM9Q9NXL9 1143 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 BTNL10A8MVZ5 291 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 TRAPPC10P48553 1259 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 PDE4DQ08499 809 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 ACVR2BQ13705 512 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 RASA3Q14644 834 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 TNFAIP8L3Q5GJ75 292 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 AKNAD1Q5T1N1 836 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 FAM83AQ86UY5 434 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 RASGEF1CQ8N431 466 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 EPS8L3Q8TE67 593 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 DCPSQ96C86 337 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 MAF1Q9H063 256 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 NAPBQ9H115 298 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 ZDHHC18Q9NUE0 388 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 KBTBD4Q9NVX7 518 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 LARSQ9P2J5 1176 aaKnown RBP11.65□□□□□ -0.54
CHD6-208ENST00000480022 COMMD3-BMI1R4GMX3 469 aa11.65□□□□□ -0.54
CHD6-208ENST00000480022 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 USP17L21D6R901 530 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 RASGRF2O14827 1237 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 TLR2O60603 784 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 SESN3P58005 492 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 BPIFB4P59827 614 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 EVX2Q03828 476 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 TMEM62Q0P6H9 643 aa11.64□□□□□ -0.55
CHD6-208ENST00000480022 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms