RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 WNT8AQ9H1J5 351 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 GMNNO75496 209 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SNRNP35Q16560 246 aaKnown RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 ZNF699Q32M78 642 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SRLQ86TD4 932 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 TBC1D1Q86TI0 1168 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SLC35G2Q8TBE7 412 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 OTUD5Q96G74 571 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SMARCAL1Q9NZC9 954 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 TMX2Q9Y320 296 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 A0A087X0T9 212 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 C19orf81C9J6K1 198 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 RTN2O75298 545 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 FAM228BP0C875 321 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 NPEPPSP55786 919 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 PDE1CQ14123 709 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 GIT2Q14161 759 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 GEN1Q17RS7 908 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 PLA2G4FQ68DD2 849 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 NME8Q8N427 588 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 RBM12Q9NTZ6 932 aaKnown RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 TJP3O95049 919 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 INHBAP08476 426 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 PSMA2P25787 234 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 CNGA1P29973 690 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 GNA15P30679 374 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 BASP1P80723 227 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 EVX2Q03828 476 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 MAP3K21Q5TCX8 1036 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 APOBEC3HQ6NTF7 200 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 PNMA5Q96PV4 448 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 VIPAS39Q9H9C1 493 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 NUB1Q9Y5A7 615 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 UBE4BO95155 1302 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 PABPN1LA6NDY0 278 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 FAM187AA6NFU0 413 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 GABPB2Q8TAK5 448 aaPredicted RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 RUBCNQ92622 972 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 MRPL4Q9BYD3 311 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 TRIM66O15016 1216 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 PRPSAP2O60256 369 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 STAT5BP51692 787 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 ARHGEF18Q6ZSZ5 1173 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 RHPN2Q8IUC4 686 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 SCFD1Q8WVM8 642 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 ZNF668Q96K58 619 aaPredicted RBP15.3■□□□□ 0.04
COL20A1-206ENST00000479501 RPS6KC1Q96S38 1066 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 SNX25Q9H3E2 840 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 AGPAT3Q9NRZ7 376 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 BCAP29Q9UHQ4 241 aa15.3■□□□□ 0.04
COL20A1-206ENST00000479501 EXOC1LA0A1B0GW35 172 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 LRRC10BA6NIK2 292 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 CALB1P05937 261 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 CDK17Q00537 523 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 TRIM65Q6PJ69 517 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 FAM49AQ9H0Q0 323 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 GAKO14976 1311 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 ICAM1P05362 532 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 H2AFXP16104 143 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 TMED2Q15363 201 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 PRAMEF18Q5VWM3 479 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 ATG4CQ96DT6 458 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 NUDT12Q9BQG2 462 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 MAFGO15525 162 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 DARS2Q6PI48 645 aaKnown RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 CCDC137Q6PK04 289 aaKnown RBP15.29■□□□□ 0.04
COL20A1-206ENST00000479501 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 ZWILCHQ9H900 591 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 PFDN1O60925 122 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 PHKA2P46019 1235 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 FUT2Q10981 343 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 TRIM72Q6ZMU5 477 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 TRAPPC11Q7Z392 1133 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 UNC45AQ9H3U1 944 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 SEPT10Q9P0V9 454 aa15.29■□□□□ 0.04
COL20A1-206ENST00000479501 ARP10275 920 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 SCP2P22307 547 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 SAMD7Q7Z3H4 446 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 BLOC1S4Q9NUP1 217 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 FGRP09769 529 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms