RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.77□□□□□ -1.65
SPC25-204ENST00000479309 REXO2Q9Y3B8 237 aaKnown RBP4.77□□□□□ -1.65
SPC25-204ENST00000479309 HS3ST4Q9Y661 456 aa4.77□□□□□ -1.65
SPC25-204ENST00000479309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.76□□□□□ -1.65
SPC25-204ENST00000479309 LCHNA4D1U4 455 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 FOXN1O15353 648 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 KDM1AO60341 852 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 CFBP00751 764 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 MYCLP1P12525 358 aaPredicted RBP4.76□□□□□ -1.65
SPC25-204ENST00000479309 NR4A1P22736 598 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 CASRP41180 1078 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 DUSP2Q05923 314 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 MGAT5Q09328 741 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 TRIM25Q14258 630 aaKnown RBP4.76□□□□□ -1.65
SPC25-204ENST00000479309 UBE3CQ15386 1083 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 VPS72Q15906 364 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 DRICH1Q6PGQ1 229 aaPredicted RBP4.76□□□□□ -1.65
SPC25-204ENST00000479309 RNF180Q86T96 592 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 ZNF276Q8N554 614 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 MB21D1Q8N884 522 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 SNX33Q8WV41 574 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 CPPED1Q9BRF8 314 aaPredicted RBP4.76□□□□□ -1.65
SPC25-204ENST00000479309 NRDE2Q9H7Z3 1164 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 CDY2AQ9Y6F7 541 aa4.76□□□□□ -1.65
SPC25-204ENST00000479309 TMEM191CA6NGB0 347 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 RAB11FIP3O75154 756 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 ULK1O75385 1050 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 RECQL4O94761 1208 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 GASTP01350 101 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 ITGB1P05556 798 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 GYS2P54840 703 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 PPARAQ07869 468 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 FAM214AQ32MH5 1076 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 ATP13A4Q4VNC1 1196 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 TAF7LQ5H9L4 462 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 PITRM1Q5JRX3 1037 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 THNSL2Q86YJ6 484 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 RPUSD2Q8IZ73 545 aaKnown RBP4.75□□□□□ -1.65
SPC25-204ENST00000479309 LILRA3Q8N6C8 439 aaPredicted RBP4.75□□□□□ -1.65
SPC25-204ENST00000479309 LEO1Q8WVC0 666 aaPredicted RBP4.75□□□□□ -1.65
SPC25-204ENST00000479309 NDC1Q9BTX1 674 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 ANO3Q9BYT9 981 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 CPEB1Q9BZB8 566 aaKnown RBP4.75□□□□□ -1.65
SPC25-204ENST00000479309 IFT22Q9H7X7 185 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 NOC2LQ9Y3T9 749 aaKnown RBP4.75□□□□□ -1.65
SPC25-204ENST00000479309 COL4A3Q01955 1670 aa4.75□□□□□ -1.65
SPC25-204ENST00000479309 FAM20BO75063 409 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 TMEM127O75204 238 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 HK1P19367 917 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 SESN3P58005 492 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 COL10A1Q03692 680 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 PDCD1Q15116 288 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 FSCN1Q16658 493 aaKnown RBP4.74□□□□□ -1.65
SPC25-204ENST00000479309 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 DDX46Q7L014 1031 aaKnown RBP4.74□□□□□ -1.65
SPC25-204ENST00000479309 USP7Q93009 1102 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 PGBD4Q96DM1 585 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 ACAP3Q96P50 834 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 DCLRE1CQ96SD1 692 aaKnown RBP4.74□□□□□ -1.65
SPC25-204ENST00000479309 AGAP2Q99490 1192 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 SLC46A2Q9BY10 475 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 KCNH6Q9H252 994 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 DMRT1Q9Y5R6 373 aa4.74□□□□□ -1.65
SPC25-204ENST00000479309 TLDC2A0PJX2 215 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 AHRRA9YTQ3 701 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 DIRC3C9JPN6 131 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 NEMP1O14524 444 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 RAMP2O60895 175 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 CTSSP25774 331 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 ZFP36P26651 326 aaKnown RBP4.73□□□□□ -1.65
SPC25-204ENST00000479309 APBA1Q02410 837 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 LAIR1Q6GTX8 287 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 CCDC62Q6P9F0 684 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 LRRC55Q6ZSA7 311 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 SYNE4Q8N205 404 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 MYEOVQ96EZ4 313 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 RAX2Q96IS3 184 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 ORAI2Q96SN7 254 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 TTC1Q99614 292 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 KCTD10Q9H3F6 313 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 SORCS3Q9UPU3 1222 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 APOBEC2Q9Y235 224 aaKnown RBP4.73□□□□□ -1.65
SPC25-204ENST00000479309 PCSK5Q92824 1860 aa4.73□□□□□ -1.65
SPC25-204ENST00000479309 GAGE12BA1L429 117 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 GAGE12HA6NDE8 117 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 TMEM200CA6NKL6 621 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 B5MCH6 92 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 RPS6KA4O75676 772 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 CLEC2LP0C7M8 214 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 ENPP1P22413 925 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 HSD3B2P26439 372 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 CRHR1P34998 444 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 LGALS4P56470 323 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 TAP1Q03518 808 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 CSRP2Q16527 193 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 CT83Q5H943 113 aa4.72□□□□□ -1.65
SPC25-204ENST00000479309 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms