RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PTGISQ16647 500 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 RNF187Q5TA31 235 aaPredicted RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 INTS8Q75QN2 995 aaKnown RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 ZNF473Q8WTR7 871 aaKnown RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 TATDN2Q93075 761 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 CALR3Q96L12 384 aaKnown RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 MYOZ2Q9NPC6 264 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 ZNRF3Q9ULT6 936 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 PLA2G6O60733 806 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 SHBGP04278 402 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 VCAM1P19320 739 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 COMTP21964 271 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 ANXA13P27216 316 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 MXI1P50539 228 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
VPS52-217ENST00000478934 DAB2IPQ5VWQ8 1189 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 PCNX4Q63HM2 1172 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 TTC27Q6P3X3 843 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 SLC39A4Q6P5W5 647 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 TMC3Q7Z5M5 1100 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 KCTD17Q8N5Z5 321 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 MDM1Q8TC05 714 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 TAS1R2Q8TE23 839 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 CCT8L2Q96SF2 557 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 EPN3Q9H201 632 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 CAPN7Q9Y6W3 813 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 UBE4BO95155 1302 aa11.66□□□□□ -0.54
VPS52-217ENST00000478934 A0A087WUV0 522 aaPredicted RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 DLATP10515 647 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 PYGMP11217 842 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 BCRP11274 1271 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 NPTX2P47972 431 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 KCNJ1P48048 391 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 GTF2BQ00403 316 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 DR1Q01658 176 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 IFT88Q13099 833 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 CUL1Q13616 776 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 SNRNP35Q16560 246 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 QPCTQ16769 361 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 SCARA3Q6AZY7 606 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 NIM1KQ8IY84 436 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 MYCBPAPQ8TBZ2 947 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 TRIM7Q9C029 511 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 TMEM206Q9H813 350 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 NOCTQ9UK39 431 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 ADGRA3Q8IWK6 1321 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 DENND3A2RUS2 1198 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 CCDC188H7C350 402 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 ZNF862O60290 1169 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 ATP2C2O75185 946 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 MUTP22033 750 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 CNGA1P29973 690 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 PLTPP55058 493 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 MAGOHP61326 146 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 TNIP1Q15025 636 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 FAM83AQ86UY5 434 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 CD302Q8IX05 232 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 RTKN2Q8IZC4 609 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 MAGOHBQ96A72 148 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 TBX20Q9UMR3 447 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
VPS52-217ENST00000478934 PFASO15067 1338 aa11.65□□□□□ -0.54
VPS52-217ENST00000478934 WNT7BP56706 349 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 SPRED3Q2MJR0 410 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 KRT71Q3SY84 523 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 NBPF12Q5TAG4 269 aaPredicted RBP11.64□□□□□ -0.55
VPS52-217ENST00000478934 ARHGEF16Q5VV41 709 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 RNF207Q6ZRF8 634 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 PRELID2Q8N945 189 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 CCDC26Q8TAB7 109 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 ZBED3Q96IU2 234 aaPredicted RBP11.64□□□□□ -0.55
VPS52-217ENST00000478934 PSMD1Q99460 953 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 PXMP2Q9NR77 195 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 TLDC2A0PJX2 215 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 HMGB1P1B2RPK0 211 aaPredicted RBP11.64□□□□□ -0.55
VPS52-217ENST00000478934 PTENP60484 403 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 GPC5P78333 572 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 FMO1Q01740 532 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 SLITRK6Q9H5Y7 841 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 GABBR1Q9UBS5 961 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
VPS52-217ENST00000478934 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
VPS52-217ENST00000478934 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 JAMLQ86YT9 394 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms