RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 EEF1DP3Q658K8 133 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 POF1BQ8WVV4 589 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 LARP4BQ92615 738 aaKnown RBP17.18■□□□□ 0.34
HMGA1-206ENST00000478214 ZNF558Q96NG5 402 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 C17orf75Q9HAS0 396 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 ARHGAP28Q9P2N2 729 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 MYO7AQ13402 2215 aa17.18■□□□□ 0.34
HMGA1-206ENST00000478214 KIAA1671Q9BY89 1806 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 N4BP3O15049 544 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 SLC16A4O15374 487 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 PLS3P13797 630 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 DDIT3P35638 169 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 BCAR1P56945 870 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 TCEAL5Q5H9L2 206 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 RRAGBQ5VZM2 374 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 TAS1R3Q7RTX0 852 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 URGCPQ8TCY9 931 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 NTPCRQ9BSD7 190 aaKnown RBP17.17■□□□□ 0.34
HMGA1-206ENST00000478214 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 NRDE2Q9H7Z3 1164 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 THEGQ9P2T0 379 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
HMGA1-206ENST00000478214 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
HMGA1-206ENST00000478214 NT5C1B-RDH14C9J2C7 533 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 B4GALT3O60512 393 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 ZC3H11AO75152 810 aaKnown RBP eCLIP17.16■□□□□ 0.34
HMGA1-206ENST00000478214 PPP6R2O75170 966 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 BRD1O95696 1058 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 POMCP01189 267 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 AKAP5P24588 427 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 IRS1P35568 1242 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 DNM1Q05193 864 aaKnown RBP17.16■□□□□ 0.34
HMGA1-206ENST00000478214 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
HMGA1-206ENST00000478214 GIT2Q14161 759 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 BECN1Q14457 450 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 SLC39A11Q8N1S5 342 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 GAD1Q99259 594 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
HMGA1-206ENST00000478214 TMEM134Q9H6X4 195 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 SPG21Q9NZD8 308 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 DNAJB4Q9UDY4 337 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 ODF2LQ9ULJ1 636 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 PHLPP2Q6ZVD8 1323 aa17.16■□□□□ 0.34
HMGA1-206ENST00000478214 XIRP2A4UGR9 3374 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 A0A087X0B3 334 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 ARL5CA6NH57 179 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 DDHD2O94830 711 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 KRT18P05783 430 aaKnown RBP17.15■□□□□ 0.34
HMGA1-206ENST00000478214 PPM1AP35813 382 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 MLH1P40692 756 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 ALDH7A1P49419 539 aaKnown RBP17.15■□□□□ 0.34
HMGA1-206ENST00000478214 SMTNP53814 917 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 UBE3AQ05086 875 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 ATF7IP2Q5U623 682 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 TMEM161BQ8NDZ6 487 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 ADPGKQ9BRR6 497 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 MIOSQ9NXC5 875 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 LARSQ9P2J5 1176 aaKnown RBP17.15■□□□□ 0.34
HMGA1-206ENST00000478214 PARP2Q9UGN5 583 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 GIT1Q9Y2X7 761 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 PCDHGC5Q9Y5F6 944 aa17.15■□□□□ 0.34
HMGA1-206ENST00000478214 INPPL1O15357 1258 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 CUTAO60888 179 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 FAM13AO94988 1023 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 GALTP07902 379 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 SLC11A1P49279 550 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 SCNN1GP51170 649 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 ZNF131P52739 623 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 ERVFC1P60507 584 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 TFF2Q03403 129 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 TMEM173Q86WV6 379 aaPredicted RBP17.14■□□□□ 0.33
HMGA1-206ENST00000478214 MYCT1Q8N699 235 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 PDILTQ8N807 584 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.33
HMGA1-206ENST00000478214 HLA-CQ95604 372 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
HMGA1-206ENST00000478214 TARS2Q9BW92 718 aaKnown RBP17.14■□□□□ 0.33
HMGA1-206ENST00000478214 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
HMGA1-206ENST00000478214 ZHX3Q9H4I2 956 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 TLR9Q9NR96 1032 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms