RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
PRPF39-203ENST00000477626 PTENP60484 403 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 ARHGEF19Q8IW93 802 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 CA12O43570 354 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 HBP1O60381 514 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 TNNT1P13805 278 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 INTS2Q9H0H0 1204 aaKnown RBP13.22□□□□□ -0.29
PRPF39-203ENST00000477626 ZHX3Q9H4I2 956 aa13.22□□□□□ -0.29
PRPF39-203ENST00000477626 NOCTQ9UK39 431 aaKnown RBP13.22□□□□□ -0.29
PRPF39-203ENST00000477626 ANXA13P27216 316 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 MTHFD1LQ6UB35 978 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 SERPING1P05155 500 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 GJB1P08034 283 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 CYP2J2P51589 502 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 ZNF572Q7Z3I7 529 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 APBA2Q99767 749 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 STK33Q9BYT3 514 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 NUCKS1Q9H1E3 243 aaKnown RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 NRBP2Q9NSY0 501 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.29
PRPF39-203ENST00000477626 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.29
PRPF39-203ENST00000477626 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.3
PRPF39-203ENST00000477626 KIAA0391O15091 583 aaKnown RBP13.21□□□□□ -0.3
PRPF39-203ENST00000477626 CCDC175P0C221 793 aa13.21□□□□□ -0.3
PRPF39-203ENST00000477626 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.3
PRPF39-203ENST00000477626 RFX1P22670 979 aa13.21□□□□□ -0.3
PRPF39-203ENST00000477626 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.3
PRPF39-203ENST00000477626 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
PRPF39-203ENST00000477626 POU5F1Q01860 360 aaKnown RBP13.2□□□□□ -0.3
PRPF39-203ENST00000477626 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 PCIF1Q9H4Z3 704 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 H0YCG3 227 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 ZNF286BP0CG31 522 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 CHRNB2P17787 502 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 YY1P25490 414 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 KIF11P52732 1056 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 SP4Q02446 784 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 PTK2Q05397 1052 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 ZACNQ401N2 412 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 MYO1AQ9UBC5 1043 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 MRFAP1Q9Y605 127 aa13.2□□□□□ -0.3
PRPF39-203ENST00000477626 ZSCAN12O43309 604 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 INSRRP14616 1297 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 HS2ST1Q7LGA3 356 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 KIAA0319LQ8IZA0 1049 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 ZNF132P52740 706 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 RRAGAQ7L523 313 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SHC3Q92529 594 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 A0A087X0T9 212 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 CCP110O43303 1012 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 FAM228BP0C875 321 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 VAV2P52735 878 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SMTNP53814 917 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
PRPF39-203ENST00000477626 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 SLC7A3Q8WY07 619 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 KCNG1Q9UIX4 513 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 PTPRDP23468 1912 aa13.19□□□□□ -0.3
PRPF39-203ENST00000477626 TMEM88BA6NKF7 163 aa13.18□□□□□ -0.3
PRPF39-203ENST00000477626 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF39-203ENST00000477626 PRAMEF19Q5SWL8 479 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms