RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 DUSP6Q16828 381 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 NT5DC1Q5TFE4 455 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 TAS1R3Q7RTX0 852 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 RBM23Q86U06 439 aaKnown RBP17.2■□□□□ 0.34
COMMD6-209ENST00000477377 EFHBQ8N7U6 833 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
COMMD6-209ENST00000477377 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 MSLNLQ96KJ4 702 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 GAD1Q99259 594 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 CXCL16Q9H2A7 254 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 PDZD7Q9H5P4 517 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 CD320Q9NPF0 282 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 C5orf42Q9H799 3197 aa17.2■□□□□ 0.34
COMMD6-209ENST00000477377 ARL5CA6NH57 179 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 HIP1RO75146 1068 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 ZC3H11AO75152 810 aaKnown RBP eCLIP17.19■□□□□ 0.34
COMMD6-209ENST00000477377 NPTXRO95502 500 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 POMCP01189 267 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 PDCP20941 246 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 AKAP5P24588 427 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 PPM1AP35813 382 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 DSC1Q08554 894 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 ARSHQ5FYA8 562 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 EEF1DP3Q658K8 133 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 SLC27A1Q6PCB7 646 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 COLGALT2Q8IYK4 626 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 IGSF21Q96ID5 467 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 ZFP42Q96MM3 310 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 C2orf40Q9H1Z8 148 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
COMMD6-209ENST00000477377 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 TNFRSF10AO00220 468 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 PRKCBP05771 671 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 MLH1P40692 756 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 NPTX2P47972 431 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 ALDH7A1P49419 539 aaKnown RBP17.18■□□□□ 0.34
COMMD6-209ENST00000477377 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 PTCRAQ6ISU1 281 aaPredicted RBP17.18■□□□□ 0.34
COMMD6-209ENST00000477377 PDE12Q6L8Q7 609 aaKnown RBP17.18■□□□□ 0.34
COMMD6-209ENST00000477377 USP49Q70CQ1 688 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 DDX53Q86TM3 631 aaKnown RBP17.18■□□□□ 0.34
COMMD6-209ENST00000477377 CABP7Q86V35 215 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 ZBTB8OSQ8IWT0 167 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 DEPTORQ8TB45 409 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 MICAL1Q8TDZ2 1067 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 AK8Q96MA6 479 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 TCF25Q9BQ70 676 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 TMEM175Q9BSA9 504 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
COMMD6-209ENST00000477377 ZBP1Q9H171 429 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 UBN1Q9NPG3 1134 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 ARHGAP28Q9P2N2 729 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 GIT1Q9Y2X7 761 aa17.18■□□□□ 0.34
COMMD6-209ENST00000477377 C2orf71A6NGG8 1288 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 NRP1O14786 923 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PLA2G4BP0C869 781 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 SCNN1GP51170 649 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PEX3P56589 373 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 KRT17Q04695 432 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PRPF4BQ13523 1007 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 MAPK6Q16659 721 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 TMEM184AQ6ZMB5 413 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 FAM178BQ8IXR5 827 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 MRPL43Q8N983 215 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 NT5C3AQ9H0P0 336 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 TLE6Q9H808 572 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PTPRHQ9HD43 1115 aa17.17■□□□□ 0.34
COMMD6-209ENST00000477377 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 FBXO2Q9UK22 296 aaPredicted RBP17.17■□□□□ 0.34
COMMD6-209ENST00000477377 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 F8W810 466 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 ABLIM1O14639 778 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 MBTPS2O43462 519 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 SLC26A4O43511 780 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 STX6O43752 255 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 BMP15O95972 392 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 LONP1P36776 959 aaKnown RBP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 EP400NLQ6ZTU2 488 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 URGCPQ8TCY9 931 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 IFT74Q96LB3 600 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 TMEM134Q9H6X4 195 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
COMMD6-209ENST00000477377 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
COMMD6-209ENST00000477377 LILRB3O75022 631 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 ALDH2P05091 517 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms