RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 CBWD2Q8IUF1 395 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 SEMA4DQ92854 862 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 GLG1Q92896 1179 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 ZSWIM1Q9BR11 485 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 RAB17Q9H0T7 212 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 CENPHQ9H3R5 247 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 ACP6Q9NPH0 428 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 TBC1D22BQ9NU19 505 aa22.71■■□□□ 1.23
LIMS2-214ENST00000476932 CHORDC1Q9UHD1 332 aaPredicted RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 SCAF8Q9UPN6 1271 aaKnown RBP22.71■■□□□ 1.23
LIMS2-214ENST00000476932 ATP9AO75110 1047 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 RTN2O75298 545 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 MTA2O94776 668 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 SNRPFP62306 86 aaKnown RBP22.7■■□□□ 1.22
LIMS2-214ENST00000476932 GPC5P78333 572 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 BIRC3Q13489 604 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 PPP2R5EQ16537 467 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 PLA2G4FQ68DD2 849 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 ZDHHC14Q8IZN3 488 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 ERP44Q9BS26 406 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 FAM107BQ9H098 131 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 SYNGAP1Q96PV0 1343 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 GOLGA6L10A0A0M3HER8 536 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 MIF4GDA9UHW6 222 aaKnown RBP22.7■■□□□ 1.22
LIMS2-214ENST00000476932 ANKRD63C9JTQ0 380 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 WNT10BO00744 389 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 RPS6P62753 249 aaKnown RBP22.7■■□□□ 1.22
LIMS2-214ENST00000476932 FMO2Q99518 471 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 TIPINQ9BVW5 301 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 EPB41L4BQ9H329 900 aa22.7■■□□□ 1.22
LIMS2-214ENST00000476932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.7■■□□□ 1.22
LIMS2-214ENST00000476932 DOCK5Q9H7D0 1870 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 RXRBP28702 533 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 PTGIRP43119 386 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 AGBL2Q5U5Z8 902 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 TADA2BQ86TJ2 420 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 JAMLQ86YT9 394 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 AGBL3Q8NEM8 1001 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 PPM1EQ8WY54 764 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 SHC3Q92529 594 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 CD101Q93033 1021 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 PAGR1Q9BTK6 254 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 A0A087WUV0 522 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 FAM187AA6NFU0 413 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 SRRM3A6NNA2 597 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 ATMINO43313 823 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 CPP00450 1065 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 PEX5P50542 639 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 SEC24CP53992 1094 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 MAP2K1Q02750 393 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 DHX34Q14147 1143 aaKnown RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 RUFY4Q6ZNE9 571 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 SLC47A2Q86VL8 602 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 PRELID2Q8N945 189 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 LPAR1Q92633 364 aa22.69■■□□□ 1.22
LIMS2-214ENST00000476932 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 COL11A1P12107 1806 aaPredicted RBP22.69■■□□□ 1.22
LIMS2-214ENST00000476932 ATXN2Q99700 1313 aaKnown RBP22.68■■□□□ 1.22
LIMS2-214ENST00000476932 CYP26A1O43174 497 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 PHF2O75151 1096 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 COMTP21964 271 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 USP8P40818 1118 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 FMO1Q01740 532 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 SNRNP35Q16560 246 aaKnown RBP22.68■■□□□ 1.22
LIMS2-214ENST00000476932 ZDHHC24Q6UX98 284 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 PACS2Q86VP3 889 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 CPNE8Q86YQ8 564 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 TMEM161BQ8NDZ6 487 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 MYCBPAPQ8TBZ2 947 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 ZNF473Q8WTR7 871 aaKnown RBP22.68■■□□□ 1.22
LIMS2-214ENST00000476932 C18orf8Q96DM3 657 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 RPS6KC1Q96S38 1066 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 KIFC3Q9BVG8 833 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 KIAA1683Q9H0B3 1180 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 TMEM110-MUSTN1A8MSY1 372 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 DCDC2CA8MYV0 355 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 KIAA0391O15091 583 aaKnown RBP22.68■■□□□ 1.22
LIMS2-214ENST00000476932 GZMAP12544 262 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 PSMC5P62195 406 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 RASA3Q14644 834 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 CLUL1Q15846 466 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 SPDYCQ5MJ68 293 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 NLRP14Q86W24 1093 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 MAP4K3Q8IVH8 894 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 ARFGAP2Q8N6H7 521 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 SAAL1Q96ER3 474 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 TBX20Q9UMR3 447 aa22.68■■□□□ 1.22
LIMS2-214ENST00000476932 MMEP08473 750 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 CTNNA2P26232 953 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 FAM102BQ5T8I3 360 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 TRMT1LQ7Z2T5 733 aaKnown RBP22.67■■□□□ 1.22
LIMS2-214ENST00000476932 PPM1KQ8N3J5 372 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 HELQQ8TDG4 1101 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 IWS1Q96ST2 819 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 PDCD2LQ9BRP1 358 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 MAP3K20Q9NYL2 800 aaKnown RBP22.67■■□□□ 1.22
LIMS2-214ENST00000476932 GRHL1Q9NZI5 618 aa22.67■■□□□ 1.22
LIMS2-214ENST00000476932 CNOT8Q9UFF9 292 aaKnown RBP22.67■■□□□ 1.22
LIMS2-214ENST00000476932 COQ4Q9Y3A0 265 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms