RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
HDAC6-219ENST00000476625 KCNB2Q92953 911 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 PGBD4Q96DM1 585 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 CXCL16Q9H2A7 254 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 RGL1Q9NZL6 768 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
HDAC6-219ENST00000476625 IPPQ9Y573 584 aa13.4□□□□□ -0.26
HDAC6-219ENST00000476625 CYP3A7-CYP3A51PA0A087WV96 503 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 TSPAN1O60635 241 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 ALDH2P05091 517 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 URODP06132 367 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 SKIP12755 728 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 NCLP19338 710 aaKnown RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 CYP3A7P24462 503 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 HSPA4P34932 840 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 GLUD2P49448 558 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 PSMC5P62195 406 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 BLIDQ8IZY5 108 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 RNF149Q8NC42 400 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 RDM1Q8NG50 284 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 PAAF1Q9BRP4 392 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 TMEM175Q9BSA9 504 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 GPR62Q9BZJ7 368 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 WDR6Q9NNW5 1121 aaKnown RBP13.39□□□□□ -0.27
HDAC6-219ENST00000476625 XPNPEP1Q9NQW7 623 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 KLK14Q9P0G3 267 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
HDAC6-219ENST00000476625 B4GALT5O43286 388 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 TGM5O43548 720 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 GLUD1P00367 558 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
HDAC6-219ENST00000476625 ITGA4P13612 1032 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 AKAP5P24588 427 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 DSC1Q08554 894 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 EMC2Q15006 297 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-219ENST00000476625 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-219ENST00000476625 DHX33Q9H6R0 707 aaKnown RBP13.38□□□□□ -0.27
HDAC6-219ENST00000476625 DLGAP2Q9P1A6 1054 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
HDAC6-219ENST00000476625 RFX1P22670 979 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 HTR4Q13639 388 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 NCAPH2Q6IBW4 605 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 GSTCDQ8NEC7 633 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 CMASQ8NFW8 434 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 PSPC1Q8WXF1 523 aaKnown RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 HAS1Q92839 578 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 LXNQ9BS40 222 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 EPS15L1Q9UBC2 864 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 MTF2Q9Y483 593 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-219ENST00000476625 DMXL1Q9Y485 3027 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
HDAC6-219ENST00000476625 ADAM12O43184 909 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 ADH1AP07327 375 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 SP9P0CG40 484 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 SRFP11831 508 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 DSG1Q02413 1049 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC6-219ENST00000476625 AMHR2Q16671 573 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 PARM1Q6UWI2 310 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-219ENST00000476625 SLC7A3Q8WY07 619 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 FGF14Q92915 247 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 PIDD1Q9HB75 910 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 SH3GLB2Q9NR46 395 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
HDAC6-219ENST00000476625 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms