RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 EPS15P42566 896 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PSMD7P51665 324 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 PRPF4BQ13523 1007 aaKnown RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 KBTBD12Q3ZCT8 623 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 TAF1BQ53T94 588 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 C10orf82Q8WW14 230 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 ZSCAN10Q96SZ4 725 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 CORO1BQ9BR76 489 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 BRD8Q9H0E9 1235 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 ARMT1Q9H993 441 aa14.8□□□□□ -0.04
HDAC1-206ENST00000476391 DDX25Q9UHL0 483 aaKnown RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 RTCBQ9Y3I0 505 aaKnown RBP14.8□□□□□ -0.04
HDAC1-206ENST00000476391 A6NJR5 290 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 BCRP11274 1271 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 NEK3P51956 506 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 ADARP55265 1226 aaKnown RBP14.79□□□□□ -0.04
HDAC1-206ENST00000476391 MARSP56192 900 aaKnown RBP14.79□□□□□ -0.04
HDAC1-206ENST00000476391 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 AGAP3Q96P47 875 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 CDC42EP4Q9H3Q1 356 aaKnown RBP14.79□□□□□ -0.04
HDAC1-206ENST00000476391 LGALS13Q9UHV8 139 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 RREB1Q92766 1687 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
HDAC1-206ENST00000476391 GSC2O15499 205 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 KRT13P13646 458 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CYP11B2P19099 503 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CRABP2P29373 138 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 GPSM2P81274 684 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DUS1LQ6P1R4 473 aaKnown RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ACAD11Q709F0 780 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ARMCX6Q7L4S7 300 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 MAP7D3Q8IWC1 876 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ZNF398Q8TD17 642 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 GFM2Q969S9 779 aaKnown RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DYDC2Q96IM9 177 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 TIMMDC1Q9NPL8 285 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 C2CD2LO14523 706 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 BIRC5O15392 142 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ASMTLO95671 621 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 MUTP22033 750 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 COPB2P35606 906 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 OXCT1P55809 520 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 TXNRD1Q16881 649 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CTC1Q2NKJ3 1217 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 SLC44A4Q53GD3 710 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 SV2BQ7L1I2 683 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 TRIM59Q8IWR1 403 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ANKRD35Q8N283 1001 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DTX3LQ8TDB6 740 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DGCR14Q96DF8 476 aaKnown RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 C18orf8Q96DM3 657 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 ECSITQ9BQ95 431 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 OXCT2Q9BYC2 517 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-206ENST00000476391 TBCCD1Q9NVR7 557 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DNAJB4Q9UDY4 337 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 PCDHA4Q9UN74 947 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 DLEC1Q9Y238 1755 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 RIC1Q4ADV7 1423 aa14.78□□□□□ -0.04
HDAC1-206ENST00000476391 CCDC194A0A1B0GVG4 234 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 EDF1O60869 148 aaKnown RBP14.77□□□□□ -0.04
HDAC1-206ENST00000476391 UQCRFS1P1P0C7P4 283 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 ALAS1P13196 640 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 IZUMO2Q6UXV1 221 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 DIS3LQ8TF46 1054 aaKnown RBP14.77□□□□□ -0.04
HDAC1-206ENST00000476391 SH3GLB2Q9NR46 395 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 DOCK2Q92608 1830 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
HDAC1-206ENST00000476391 FAM47DPA6NHR8 397 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 NBPF26B4DH59 902 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 SUPT3HO75486 399 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 DNAJC3Q13217 504 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 ADAT2Q7Z6V5 191 aaKnown RBP14.77□□□□□ -0.05
HDAC1-206ENST00000476391 CLNKQ7Z7G1 428 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 ALDH16A1Q8IZ83 802 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 MAGEB6Q8N7X4 407 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 RBM46Q8TBY0 533 aaKnown RBP14.77□□□□□ -0.05
HDAC1-206ENST00000476391 ABTB1Q969K4 478 aaPredicted RBP14.77□□□□□ -0.05
HDAC1-206ENST00000476391 POLR3CQ9BUI4 534 aaPredicted RBP14.77□□□□□ -0.05
HDAC1-206ENST00000476391 UNC45AQ9H3U1 944 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 ZNF148Q9UQR1 794 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 FAM205AQ6ZU69 1335 aa14.77□□□□□ -0.05
HDAC1-206ENST00000476391 F8W8V4 182 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 EXOC3O60645 756 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 ACSL3O95573 720 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 GGPS1O95749 300 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 PLCG2P16885 1265 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 VCAM1P19320 739 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 PPATQ06203 517 aa14.76□□□□□ -0.05
HDAC1-206ENST00000476391 GRM2Q14416 872 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms