RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CYP26C1Q6V0L0 522 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 COLGALT2Q8IYK4 626 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 FBXL16Q8N461 479 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 SLC44A3Q8N4M1 653 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 RNF149Q8NC42 400 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 CNNM3Q8NE01 707 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 KCNB2Q92953 911 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 MYADMQ96S97 322 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 EPS15L1Q9UBC2 864 aa22.85■■□□□ 1.25
VPS36-203ENST00000475375 ARL5CA6NH57 179 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 CPLX1O14810 134 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 SLC37A4O43826 429 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 NR1I2O75469 434 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 PSMA5P28066 241 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 HSPA4P34932 840 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 MLH1P40692 756 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 PALB2Q86YC2 1186 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 SMG8Q8ND04 991 aaKnown RBP22.84■■□□□ 1.25
VPS36-203ENST00000475375 MBOAT7Q96N66 472 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 GAD1Q99259 594 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 HINFPQ9BQA5 517 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 APOL6Q9BWW8 343 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 AGXT2Q9BYV1 514 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 DHX33Q9H6R0 707 aaKnown RBP22.84■■□□□ 1.25
VPS36-203ENST00000475375 IPPQ9Y573 584 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 R4GN57 208 aa22.84■■□□□ 1.25
VPS36-203ENST00000475375 MARCH6O60337 910 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 P4HBP07237 508 aaKnown RBP22.83■■□□□ 1.25
VPS36-203ENST00000475375 SRFP11831 508 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 PPP2R5CQ13362 524 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 EMC2Q15006 297 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 KIAA0319Q5VV43 1072 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 GLYCTKQ8IVS8 523 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 GPR152Q8TDT2 470 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 TCP11Q8WWU5 503 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 NXPE3Q969Y0 559 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 EIF2AQ9BY44 585 aaKnown RBP22.83■■□□□ 1.25
VPS36-203ENST00000475375 SEMA4AQ9H3S1 761 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 PPME1Q9Y570 386 aa22.83■■□□□ 1.25
VPS36-203ENST00000475375 ZNF292O60281 2723 aa22.83■■□□□ 1.24
VPS36-203ENST00000475375 DMXL1Q9Y485 3027 aa22.83■■□□□ 1.24
VPS36-203ENST00000475375 GAS2O43903 313 aaKnown RBP22.82■■□□□ 1.24
VPS36-203ENST00000475375 DEXIO95424 95 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 SCNN1GP51170 649 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 NCBP1Q09161 790 aaKnown RBP22.82■■□□□ 1.24
VPS36-203ENST00000475375 GET4Q7L5D6 327 aaPredicted RBP22.82■■□□□ 1.24
VPS36-203ENST00000475375 OTUD6AQ7L8S5 288 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 KRT25Q7Z3Z0 450 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 KIAA2013Q8IYS2 634 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 DAGLBQ8NCG7 672 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 ZNF707Q96C28 371 aaPredicted RBP22.82■■□□□ 1.24
VPS36-203ENST00000475375 CPB2Q96IY4 423 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 B3GALT6Q96L58 329 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 FAM20AQ96MK3 541 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 COLEC11Q9BWP8 271 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 RHOBTB2Q9BYZ6 727 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 RNF39Q9H2S5 420 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 RXFP1Q9HBX9 757 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 WRAP73Q9P2S5 460 aaPredicted RBP22.82■■□□□ 1.24
VPS36-203ENST00000475375 VAV3Q9UKW4 847 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 HES2Q9Y543 173 aa22.82■■□□□ 1.24
VPS36-203ENST00000475375 FRYLO94915 3013 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 F8W810 466 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 M0R2N6 131 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 ASAP2O43150 1006 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 DCNP07585 359 aaKnown RBP22.81■■□□□ 1.24
VPS36-203ENST00000475375 YWHABP31946 246 aaKnown RBP22.81■■□□□ 1.24
VPS36-203ENST00000475375 DSG1Q02413 1049 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 XKR9Q5GH70 373 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 GALNT17Q6IS24 598 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 NOTUMQ6P988 496 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 FERMT3Q86UX7 667 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 ZFP42Q96MM3 310 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 LXNQ9BS40 222 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 TRIM6Q9C030 488 aaPredicted RBP22.81■■□□□ 1.24
VPS36-203ENST00000475375 PLEKHA4Q9H4M7 779 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.81■■□□□ 1.24
VPS36-203ENST00000475375 SIT1Q9Y3P8 196 aa22.81■■□□□ 1.24
VPS36-203ENST00000475375 CCDC194A0A1B0GVG4 234 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 INO80B-WBP1J3KQ70 363 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 TSPAN1O60635 241 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 HACE1Q8IYU2 909 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 ST13P5Q8NFI4 369 aaPredicted RBP22.8■■□□□ 1.24
VPS36-203ENST00000475375 HDAC7Q8WUI4 952 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 AIFM3Q96NN9 605 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 NT5C3AQ9H0P0 336 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 ARHGEF3Q9NR81 526 aa22.8■■□□□ 1.24
VPS36-203ENST00000475375 TGM5O43548 720 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 LAMP2P13473 410 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 AXLP30530 894 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 EVCP57679 992 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 DSC1Q08554 894 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 NCAPH2Q6IBW4 605 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 ZC3H14Q6PJT7 736 aaKnown RBP22.79■■□□□ 1.24
VPS36-203ENST00000475375 CPLX2Q6PUV4 134 aaKnown RBP22.79■■□□□ 1.24
VPS36-203ENST00000475375 C4orf19Q8IY42 314 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 RNF168Q8IYW5 571 aaPredicted RBP22.79■■□□□ 1.24
VPS36-203ENST00000475375 RMDN1Q96DB5 314 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 CCDC51Q96ER9 411 aa22.79■■□□□ 1.24
VPS36-203ENST00000475375 MTRQ99707 1265 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms