RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 KIF20AO95235 890 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 GHRP10912 638 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 PROZP22891 400 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 CCNE1P24864 410 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ADSSP30520 456 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 PPP1R2P41236 205 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 STX17P56962 302 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 STRN3Q13033 797 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 PCBP1Q15365 356 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL8A1-206ENST00000474648 KLHL10Q6JEL2 608 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 TTI2Q6NXR4 508 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ZPBP2Q6X784 338 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 TSHZ1Q6ZSZ6 1077 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 CCDC155Q8N6L0 562 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 P2RX5Q93086 422 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ZBTB45Q96K62 511 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-206ENST00000474648 DUSP9Q99956 384 aaKnown RBP10.98□□□□□ -0.65
COL8A1-206ENST00000474648 HAPLN2Q9GZV7 340 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ERVK-5Q9HDB9 667 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 RWDD2AQ9UIY3 292 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 ST3GAL5Q9UNP4 418 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 TRAF3IP3Q9Y228 551 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 STYXL1Q9Y6J8 313 aa10.98□□□□□ -0.65
COL8A1-206ENST00000474648 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 EVPLQ92817 2033 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TRIM49BA6NDI0 452 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PSMA7O14818 248 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TIMP1P01033 207 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CD52P31358 61 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CCL23P55773 120 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 SNRPFP62306 86 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PAK1Q13153 545 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 STIM1Q13586 685 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 DSC3Q14574 896 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 NCAPHQ15003 741 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 IQCB1Q15051 598 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 EEF1DP3Q658K8 133 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 FOXR2Q6PJQ5 311 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CATSPER4Q7RTX7 472 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 ZC3H3Q8IXZ2 948 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 SYCP3Q8IZU3 236 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TMEM174Q8WUU8 243 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 SCLYQ96I15 445 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CPB2Q96IY4 423 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PRIMPOLQ96LW4 560 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 BPIFA3Q9BQP9 254 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 MRPL4Q9BYD3 311 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PPP1R12CQ9BZL4 782 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 GBP3Q9H0R5 595 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TSPY26PQ9H489 355 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 AGPAT3Q9NRZ7 376 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TYW1Q9NV66 732 aaKnown RBP10.97□□□□□ -0.65
COL8A1-206ENST00000474648 DMAC2Q9NW81 257 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 PADI3Q9ULW8 664 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 EXOC7Q9UPT5 735 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CTNND2Q9UQB3 1225 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 TNFSF13BQ9Y275 285 aa10.97□□□□□ -0.65
COL8A1-206ENST00000474648 CNTNAP2Q9UHC6 1331 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 A0A0B4J269 797 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 GPR182O15218 404 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CLIC2O15247 247 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 TOM1L1O75674 476 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CXCL10P02778 98 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL8A1-206ENST00000474648 AXLP30530 894 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 ZNF165P49910 485 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 NFIL3Q16649 462 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 TCTN1Q2MV58 587 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 UBXN11Q5T124 520 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 ATF7IP2Q5U623 682 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 RTN4RL1Q86UN2 441 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CDR2LQ86X02 465 aaPredicted RBP10.96□□□□□ -0.65
COL8A1-206ENST00000474648 SLC9A9Q8IVB4 645 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 DHX40Q8IX18 779 aaKnown RBP10.96□□□□□ -0.65
COL8A1-206ENST00000474648 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 USP38Q8NB14 1042 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 PDZD7Q9H5P4 517 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CBX8Q9HC52 389 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 AGPAT5Q9NUQ2 364 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.65
COL8A1-206ENST00000474648 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-206ENST00000474648 MGEA5O60502 916 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 ERLIN2O94905 339 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 PARNO95453 639 aaKnown RBP10.95□□□□□ -0.66
COL8A1-206ENST00000474648 CAVIN2O95810 425 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 NR3C1P04150 777 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 GARTP22102 1010 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 LIG4P49917 911 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms