RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 RPL13P26373 211 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 SNRPFP62306 86 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 NFX1Q12986 1120 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
CNN3-205ENST00000474409 EDRF1Q3B7T1 1238 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ZCWPW2Q504Y3 356 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 FBXO47Q5MNV8 452 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ATF7IP2Q5U623 682 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 SPATA1Q5VX52 437 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ANKRD40Q6AI12 368 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 SLFN12LQ6IEE8 588 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 NOTUMQ6P988 496 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 TSHZ1Q6ZSZ6 1077 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 FAM228AQ86W67 206 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 FAM114A1Q8IWE2 563 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 CPB2Q96IY4 423 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ADPGKQ9BRR6 497 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 CBWD1Q9BRT8 395 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 TCHPQ9BT92 498 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 NOC4LQ9BVI4 516 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 TARS2Q9BW92 718 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 IKZF4Q9H2S9 585 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 AGPAT5Q9NUQ2 364 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 TRAF3IP3Q9Y228 551 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 NOC2LQ9Y3T9 749 aaKnown RBP9.12□□□□□ -0.95
CNN3-205ENST00000474409 NFE2L3Q9Y4A8 694 aa9.12□□□□□ -0.95
CNN3-205ENST00000474409 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 CETN3O15182 167 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 GPR182O15218 404 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 CLDN3O15551 220 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TGFB1I1O43294 461 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 EXOC3O60645 756 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TOM1L1O75674 476 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 IQCF3P0C7M6 154 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 GARTP22102 1010 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 AXLP30530 894 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 ADAM9Q13443 819 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 HSP90AA2PQ14568 343 aaPredicted RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 IQCB1Q15051 598 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 NFIL3Q16649 462 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 AMHR2Q16671 573 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 CCDC40Q4G0X9 1142 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 HSP90AA4PQ58FG1 418 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TWF2Q6IBS0 349 aaKnown RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 SLC39A4Q6P5W5 647 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 FOXR2Q6PJQ5 311 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 ZBTB33Q86T24 672 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 CDR2LQ86X02 465 aaPredicted RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 GAS2L3Q86XJ1 694 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 CREBRFQ8IUR6 639 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 C12orf56Q8IXR9 622 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 USP38Q8NB14 1042 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 XXYLT1Q8NBI6 393 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 ANKRD20A12PQ8NF67 263 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 SAAL1Q96ER3 474 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 ACO2Q99798 780 aaKnown RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 MSTO1Q9BUK6 570 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 HTATIP2Q9BUP3 242 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
CNN3-205ENST00000474409 RBSNQ9H1K0 784 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 HSPBP1Q9NZL4 362 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 PRKAG2Q9UGJ0 569 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 TNFSF13BQ9Y275 285 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 SQORQ9Y6N5 450 aa9.11□□□□□ -0.95
CNN3-205ENST00000474409 UMODL1Q5DID0 1318 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 GOLGA6L3A6NEY3 463 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 KIAA0391O15091 583 aaKnown RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 SLC16A3O15427 465 aaKnown RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 PARNO95453 639 aaKnown RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 NPTXRO95502 500 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 EPB41P11171 864 aaKnown RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 RAG1P15918 1043 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
CNN3-205ENST00000474409 CD52P31358 61 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 SPAG1Q07617 926 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 LPIN1Q14693 890 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 NCAPHQ15003 741 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 DCAF4L1Q3SXM0 396 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 SLC27A1Q6PCB7 646 aa9.1□□□□□ -0.95
CNN3-205ENST00000474409 LRRC55Q6ZSA7 311 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms