RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 MRPL43Q8N983 215 aaKnown RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 TMEM169Q96HH4 297 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 IGSF21Q96ID5 467 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
CKS1B-206ENST00000474215 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 DNAJB4Q9UDY4 337 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 HES2Q9Y543 173 aa12.36□□□□□ -0.43
CKS1B-206ENST00000474215 FSD2A1L4K1 749 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 HIDE1A8MVS5 230 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 ACKR2O00590 384 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 INPPL1O15357 1258 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 B4GALT3O60512 393 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 TBX10O75333 385 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 NPTXRO95502 500 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 CXCL14O95715 111 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 IL9P15248 144 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 SYT1P21579 422 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 SLC11A1P49279 550 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 NDUFV1P49821 464 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
CKS1B-206ENST00000474215 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
CKS1B-206ENST00000474215 CLUL1Q15846 466 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 PLPP4Q5VZY2 271 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 DDX53Q86TM3 631 aaKnown RBP12.35□□□□□ -0.43
CKS1B-206ENST00000474215 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
CKS1B-206ENST00000474215 MSLNLQ96KJ4 702 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 AK8Q96MA6 479 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 GAD1Q99259 594 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 NT5C3AQ9H0P0 336 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
CKS1B-206ENST00000474215 CLEC1BQ9P126 229 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 CD207Q9UJ71 328 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 PLXNA4Q9HCM2 1894 aa12.35□□□□□ -0.43
CKS1B-206ENST00000474215 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 K7ERI5 159 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 N4BP3O15049 544 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 SLC26A4O43511 780 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 HIP1RO75146 1068 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 GLP2RO95838 553 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 PRKCBP05771 671 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 LIG1P18858 919 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 AKAP5P24588 427 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 MLH1P40692 756 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 UBA7P41226 1012 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 CABP7Q86V35 215 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 DAW1Q8N136 415 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 VPS52Q8N1B4 723 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 BCL7CQ8WUZ0 217 aaPredicted RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 DRC1Q96MC2 740 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 ZFP42Q96MM3 310 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 PLIN2Q99541 437 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 KIFC3Q9BVG8 833 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 RUSC1Q9BVN2 902 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 TIPINQ9BVW5 301 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 PDZD7Q9H5P4 517 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 STK39Q9UEW8 545 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
CKS1B-206ENST00000474215 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
CKS1B-206ENST00000474215 CCDC169A6NNP5 214 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 NRP1O14786 923 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 MBTPS2O43462 519 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 GUCY2CP25092 1073 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 NPTX2P47972 431 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 PEX3P56589 373 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 COASYQ13057 564 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 MAPK7Q13164 816 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 SMAD4Q13485 552 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 KCNC3Q14003 757 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 COLGALT2Q8IYK4 626 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 GJD3Q8N144 294 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 GSTCDQ8NEC7 633 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 VN1R2Q8NFZ6 395 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 SNX21Q969T3 373 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 NTPCRQ9BSD7 190 aaKnown RBP12.33□□□□□ -0.44
CKS1B-206ENST00000474215 C17orf75Q9HAS0 396 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 CD320Q9NPF0 282 aa12.33□□□□□ -0.44
CKS1B-206ENST00000474215 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms