RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 C2orf40Q9H1Z8 148 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 TLE6Q9H808 572 aa19.83■□□□□ 0.77
UPF3A-203ENST00000474056 PRKCBP05771 671 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 MLH1P40692 756 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 SLC11A1P49279 550 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 RBM10P98175 930 aaKnown RBP19.82■□□□□ 0.76
UPF3A-203ENST00000474056 PPP2R5AQ15172 486 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 DUSP6Q16828 381 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 PUS10Q3MIT2 529 aaKnown RBP19.82■□□□□ 0.76
UPF3A-203ENST00000474056 HYIQ5T013 277 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 TMC7Q7Z402 723 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 DEPTORQ8TB45 409 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 IGSF21Q96ID5 467 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 IFT74Q96LB3 600 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 GAD1Q99259 594 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 PLIN2Q99541 437 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 RUSC1Q9BVN2 902 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 CCDC113Q9H0I3 377 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 NGRNQ9NPE2 291 aaKnown RBP19.82■□□□□ 0.76
UPF3A-203ENST00000474056 FOXD4L1Q9NU39 408 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 CLEC1BQ9P126 229 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 BARX2Q9UMQ3 279 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-203ENST00000474056 USP20Q9Y2K6 914 aa19.82■□□□□ 0.76
UPF3A-203ENST00000474056 K7ELQ4 463 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-203ENST00000474056 LIG1P18858 919 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 PDCP20941 246 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 SCNN1GP51170 649 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 MAPK6Q16659 721 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 RINT1Q6NUQ1 792 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 FAM178BQ8IXR5 827 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 DAW1Q8N136 415 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 VN1R2Q8NFZ6 395 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 MSLNLQ96KJ4 702 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 ZFP42Q96MM3 310 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 FAM193BQ96PV7 902 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-203ENST00000474056 ZBP1Q9H171 429 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 PDZD7Q9H5P4 517 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 UBN1Q9NPG3 1134 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 MIOSQ9NXC5 875 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 KANSL3Q9P2N6 904 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 CD207Q9UJ71 328 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 C5orf42Q9H799 3197 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 CITO14578 2027 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 BDP1A6H8Y1 2624 aa19.81■□□□□ 0.76
UPF3A-203ENST00000474056 ARL5CA6NH57 179 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 INPPL1O15357 1258 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 MBTPS2O43462 519 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 HIP1RO75146 1068 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 SYT1P21579 422 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 AKAP5P24588 427 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 GRIN1Q05586 938 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 SF3A1Q15459 793 aaKnown RBP19.8■□□□□ 0.76
UPF3A-203ENST00000474056 C1orf186Q6ZWK4 172 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
UPF3A-203ENST00000474056 CDCA3Q99618 268 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-203ENST00000474056 CD320Q9NPF0 282 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 GIT1Q9Y2X7 761 aa19.8■□□□□ 0.76
UPF3A-203ENST00000474056 CARNS1A5YM72 827 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 ACKR2O00590 384 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 CA8P35219 290 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 RESTQ13127 1097 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 MAPK7Q13164 816 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 SMAD4Q13485 552 aaKnown RBP19.79■□□□□ 0.76
UPF3A-203ENST00000474056 PRPF4BQ13523 1007 aaKnown RBP19.79■□□□□ 0.76
UPF3A-203ENST00000474056 KCNC3Q14003 757 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 SMC1AQ14683 1233 aaKnown RBP19.79■□□□□ 0.76
UPF3A-203ENST00000474056 TMEM132AQ24JP5 1023 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 TMEM119Q4V9L6 283 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 DDX53Q86TM3 631 aaKnown RBP19.79■□□□□ 0.76
UPF3A-203ENST00000474056 CABP7Q86V35 215 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 HACE1Q8IYU2 909 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 VPS52Q8N1B4 723 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 AUTS2Q8WXX7 1259 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 CDK5RAP3Q96JB5 506 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 TMEM175Q9BSA9 504 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 VN1R3Q9BXE9 311 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 NT5C3AQ9H0P0 336 aa19.79■□□□□ 0.76
UPF3A-203ENST00000474056 C2orf71A6NGG8 1288 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 NRP1O14786 923 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 N4BP3O15049 544 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 BMP15O95972 392 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 PEX3P56589 373 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 SMAD2Q15796 467 aaKnown RBP19.78■□□□□ 0.76
UPF3A-203ENST00000474056 EEF1DP3Q658K8 133 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 COLGALT2Q8IYK4 626 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 GSTCDQ8NEC7 633 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 AK8Q96MA6 479 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 KLK14Q9P0G3 267 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 PARP2Q9UGN5 583 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 FAM50BQ9Y247 325 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 FAN1Q9Y2M0 1017 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 CLIC4Q9Y696 253 aa19.78■□□□□ 0.76
UPF3A-203ENST00000474056 FSD2A1L4K1 749 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 CCDC169A6NNP5 214 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 SSBP05455 408 aaKnown RBP eCLIP19.77■□□□□ 0.76
UPF3A-203ENST00000474056 NPTX2P47972 431 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 EFNA5P52803 228 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 DSC1Q08554 894 aa19.77■□□□□ 0.76
UPF3A-203ENST00000474056 RAD51AP2Q09MP3 1159 aa19.77■□□□□ 0.76
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