RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 NOCTQ9UK39 431 aaKnown RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 DAAM1Q9Y4D1 1078 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 CNTNAP1P78357 1384 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 NFIBO00712 420 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 CALCAP01258 141 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 PAEPP09466 180 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 PYGMP11217 842 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 VAMP7P51809 220 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 HADHBP55084 474 aaKnown RBP11.8□□□□□ -0.52
C9orf3-214ENST00000473778 DGKZQ13574 1117 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 UGCGQ16739 394 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 CD101Q93033 1021 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 TEKT3Q9BXF9 490 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 TMX4Q9H1E5 349 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-214ENST00000473778 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 KCND2Q9NZV8 630 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 SCAF8Q9UPN6 1271 aaKnown RBP11.8□□□□□ -0.52
C9orf3-214ENST00000473778 ZNF536O15090 1300 aa11.8□□□□□ -0.52
C9orf3-214ENST00000473778 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 GOLGA8JA6NMD2 632 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 SRRM3A6NNA2 597 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 DNM1LO00429 736 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 TP73O15350 636 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 KRT13P13646 458 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 USP8P40818 1118 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 RARRES1P49788 294 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 MESDQ14696 234 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 SIX1Q15475 284 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 RNF187Q5TA31 235 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 UHMK1Q8TAS1 419 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 PSMD1Q99460 953 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 POP1Q99575 1024 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 RAB17Q9H0T7 212 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 ARHGEF10LQ9HCE6 1279 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 HSPBP1Q9NZL4 362 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 CYP26A1O43174 497 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 KIAA0754O94854 1291 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 MMEP08473 750 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 MUTP22033 750 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 CTNNA2P26232 953 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 ADSSP30520 456 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 KCNJ1P48048 391 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 PMS2P54278 862 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 IFI35P80217 286 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 MRPS9P82933 396 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 SLC29A2Q14542 456 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 C11orf63Q6NUN7 778 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 KRT27Q7Z3Y8 459 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 CCDC13Q8IYE1 715 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 CEP120Q8N960 986 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 PABPC3Q9H361 631 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
C9orf3-214ENST00000473778 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 COL2A1P02458 1487 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-214ENST00000473778 C5orf60A6NFR6 353 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 PHF2O75151 1096 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 NUDT17P0C025 328 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 BCRP11274 1271 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 FGFR4P22455 802 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SETQ01105 290 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SF3A3Q12874 501 aaKnown RBP eCLIP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 INTS8Q75QN2 995 aaKnown RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 CBWD2Q8IUF1 395 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 RHOT2Q8IXI1 618 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 TATDN2Q93075 761 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 QTRT2Q9H974 415 aaKnown RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 COL4A5P29400 1685 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SLC16A4O15374 487 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 HSD17B4P51659 736 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 GPC5P78333 572 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 FMO1Q01740 532 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 IFFO1Q0D2I5 559 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 NSMFQ6X4W1 530 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 STXBP4Q6ZWJ1 553 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 MIER3Q7Z3K6 550 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SPATS2Q86XZ4 545 aaKnown RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 RIT2Q99578 217 aa11.78□□□□□ -0.52
C9orf3-214ENST00000473778 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 TOPORSQ9NS56 1045 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-214ENST00000473778 SYNPO2Q9UMS6 1093 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms