RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 TMEM221A6NGB7 291 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 M0R296 226 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 PTENP60484 403 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 CLUL1Q15846 466 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 PTPROQ16827 1216 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 HYIQ5T013 277 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 TRIM67Q6ZTA4 783 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 CMTR2Q8IYT2 770 aaKnown RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 PBXIP1Q96AQ6 731 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
CLRN1-205ENST00000472224 SRPRBQ9Y5M8 271 aaKnown RBP13.12□□□□□ -0.31
CLRN1-205ENST00000472224 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 H3BNC9 293 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 SPTLC2O15270 562 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 MBTPS2O43462 519 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 TSPAN1O60635 241 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 NCLP19338 710 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 NAMPTP43490 491 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 USP49Q70CQ1 688 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 LPPQ93052 612 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 ZNF689Q96CS4 500 aaPredicted RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 EPSTI1Q96J88 318 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 PRRX2Q99811 253 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 FAM105AQ9NUU6 356 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
CLRN1-205ENST00000472224 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
CLRN1-205ENST00000472224 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 B4GALT5O43286 388 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 HOXA2O43364 376 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 SLC26A4O43511 780 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 PRKCBP05771 671 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 SKIP12755 728 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 VCPP55072 806 aaKnown RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 PEX3P56589 373 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 POU5F1BQ06416 359 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 DMP1Q13316 513 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 GPM6BQ13491 265 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 MCM6Q14566 821 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 CDCA2Q69YH5 1023 aaPredicted RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 C1orf186Q6ZWK4 172 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 SAMD11Q96NU1 681 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 CCSER1Q9C0I3 900 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
CLRN1-205ENST00000472224 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
CLRN1-205ENST00000472224 TBX10O75333 385 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 YEATS4O95619 227 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 AXLP30530 894 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 RAB27AP51159 221 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 FAM189BP81408 668 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 DNM1Q05193 864 aaKnown RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 HYAL1Q12794 435 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 AMHR2Q16671 573 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 FBXL6Q8N531 539 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 SYT2Q8N9I0 419 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 RAD54LQ92698 747 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
CLRN1-205ENST00000472224 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
CLRN1-205ENST00000472224 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms