RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 FMO5P49326 533 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 REEP2Q9BRK0 252 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 POLR3FQ9H1D9 316 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 HSPA8P11142 646 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 GALCP54803 685 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 GUCY1A3Q02108 690 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 SNRNP48Q6IEG0 339 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 ATL2Q8NHH9 583 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 GCOM2Q9BZD3 368 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 MARK3P27448 753 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 KRT17Q04695 432 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 GPS1Q13098 491 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 EIF3DO15371 548 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCCB-210ENST00000471595 PDHBP11177 359 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 MDM2Q00987 491 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 TAF1BQ53T94 588 aaPredicted RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 DALRD3Q5D0E6 543 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
PCCB-210ENST00000471595 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 PPARGC1AQ9UBK2 798 aaKnown RBP13.8□□□□□ -0.2
PCCB-210ENST00000471595 FSCBQ5H9T9 825 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 OR6B3Q8NGW1 331 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 TBC1D16Q8TBP0 767 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 MKNK1Q9BUB5 465 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 AGXT2Q9BYV1 514 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 STOML1Q9UBI4 398 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 PCDHA10Q9Y5I2 948 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 HAUS5O94927 633 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 GRIN1Q05586 938 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 TROAPQ12815 778 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
PCCB-210ENST00000471595 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
PCCB-210ENST00000471595 APOBEC2Q9Y235 224 aaKnown RBP13.79□□□□□ -0.2
PCCB-210ENST00000471595 C21orf2O43822 256 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 KLC3Q6P597 504 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 PPLO60437 1756 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 HSPA4LO95757 839 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 MX2P20592 715 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
PCCB-210ENST00000471595 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
PCCB-210ENST00000471595 SPAG7O75391 227 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 PDIA2Q13087 525 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 PPP6R3Q5H9R7 873 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 INTUQ9ULD6 942 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 FAF1Q9UNN5 650 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 YWHABP31946 246 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 ESRRGP62508 458 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 MCUQ8NE86 351 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 C1orf54Q8WWF1 131 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ECT2Q9H8V3 914 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 KPNA7A9QM74 516 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 CYP26A1O43174 497 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 SATB1Q01826 763 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 NCAPHQ15003 741 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ZNF473Q8WTR7 871 aaKnown RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 HSPBP1Q9NZL4 362 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 SCP2P22307 547 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ZNF189O75820 626 aaPredicted RBP13.78□□□□□ -0.2
PCCB-210ENST00000471595 TMEM253P0C7T8 217 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 PAMP19021 973 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ITIH2P19823 946 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 SDC4P31431 198 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
PCCB-210ENST00000471595 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.2
PCCB-210ENST00000471595 CACYBPQ9HB71 228 aaKnown RBP13.77□□□□□ -0.2
PCCB-210ENST00000471595 DONSONQ9NYP3 566 aa13.77□□□□□ -0.2
PCCB-210ENST00000471595 KDM6AO15550 1401 aaPredicted RBP13.77□□□□□ -0.2
PCCB-210ENST00000471595 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.2
PCCB-210ENST00000471595 ROR1Q01973 937 aa13.77□□□□□ -0.2
PCCB-210ENST00000471595 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.2
PCCB-210ENST00000471595 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms