RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 COQ4Q9Y3A0 265 aa20.14■□□□□ 0.81
COL20A1-205ENST00000471582 IGSF9BQ9UPX0 1349 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 LRRN2O75325 713 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 ICAM3P32942 547 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 HADHBP55084 474 aaKnown RBP20.13■□□□□ 0.81
COL20A1-205ENST00000471582 PRKCEQ02156 737 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 TCEAL1Q15170 157 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 CBWD2Q8IUF1 395 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 CCDC60Q8IWA6 550 aaPredicted RBP20.13■□□□□ 0.81
COL20A1-205ENST00000471582 ANKRD13AQ8IZ07 590 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 SLC35G2Q8TBE7 412 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 PARD3BQ8TEW8 1205 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 KCNN1Q92952 543 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 ATP6V0A4Q9HBG4 840 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 CYP26B1Q9NR63 512 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 VPS18Q9P253 973 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 PFASO15067 1338 aa20.13■□□□□ 0.81
COL20A1-205ENST00000471582 PGRMC1O00264 195 aaKnown RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 PPATQ06203 517 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 KRT39Q6A163 491 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 TRMT1LQ7Z2T5 733 aaKnown RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 RASGEF1CQ8N431 466 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 ZSWIM2Q8NEG5 633 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 SCFD2Q8WU76 684 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 MFSD14AQ96MC6 490 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 GOLPH3Q9H4A6 298 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 TMEM8AQ9HCN3 771 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 A0A0G2JMZ2 1700 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 HEXIM1O94992 359 aaKnown RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 GARTP22102 1010 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 XKR3Q5GH77 459 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 RHOT2Q8IXI1 618 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 EIF1ADQ8N9N8 165 aaKnown RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 XPNPEP1Q9NQW7 623 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 AMFRQ9UKV5 643 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
COL20A1-205ENST00000471582 FAN1Q9Y2M0 1017 aa20.12■□□□□ 0.81
COL20A1-205ENST00000471582 GOLGA8IPA6NC78 632 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 GOLGA8JA6NMD2 632 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 SYF2O95926 243 aaKnown RBP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 GLI1P08151 1106 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 TTLL12Q14166 644 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 STXBP2Q15833 593 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 SLC39A4Q6P5W5 647 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 SND1Q7KZF4 910 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 FAM71AQ8IYT1 594 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 METTL13Q8N6R0 699 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 PROCA1Q8NCQ7 364 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 IFT74Q96LB3 600 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 KRT12Q99456 494 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 ISCUQ9H1K1 167 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 ELP3Q9H9T3 547 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 ARHGAP28Q9P2N2 729 aa20.11■□□□□ 0.81
COL20A1-205ENST00000471582 SEPT9Q9UHD8 586 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 TTC7AQ9ULT0 858 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-205ENST00000471582 TMCO5BA8MYB1 307 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 CCDC188H7C350 402 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 CEP104O60308 925 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 BUB1BO60566 1050 aaPredicted RBP20.1■□□□□ 0.81
COL20A1-205ENST00000471582 GPC3P51654 580 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 MFAP3P55082 362 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 PAK2Q13177 524 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 SHC3Q92529 594 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 SAAL1Q96ER3 474 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 FBXO40Q9UH90 709 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 DOCK5Q9H7D0 1870 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 ADGRA3Q8IWK6 1321 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 GOLGA6BA6NDN3 693 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 ATG7O95352 703 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 CYP24A1Q07973 514 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 TREML2Q5T2D2 321 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 GADL1Q6ZQY3 521 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 PALB2Q86YC2 1186 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 OTUD5Q96G74 571 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 GDAP1L1Q96MZ0 367 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 THAP2Q9H0W7 228 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 OSGEPQ9NPF4 335 aa20.1■□□□□ 0.81
COL20A1-205ENST00000471582 SEPT11Q9NVA2 429 aaKnown RBP20.1■□□□□ 0.81
COL20A1-205ENST00000471582 CXCL11O14625 94 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 HNRNPDLO14979 420 aaKnown RBP20.09■□□□□ 0.81
COL20A1-205ENST00000471582 GZMAP12544 262 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 ABCB4P21439 1286 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 MRPS25P82663 173 aaKnown RBP20.09■□□□□ 0.81
COL20A1-205ENST00000471582 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
COL20A1-205ENST00000471582 LBX2Q6XYB7 198 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 GPD1LQ8N335 351 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 EPS8L1Q8TE68 723 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 SLC20A1Q8WUM9 679 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 POMGNT1Q8WZA1 660 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 TAS2R14Q9NYV8 317 aa20.09■□□□□ 0.81
COL20A1-205ENST00000471582 NOCTQ9UK39 431 aaKnown RBP20.09■□□□□ 0.81
COL20A1-205ENST00000471582 NOC2LQ9Y3T9 749 aaKnown RBP20.09■□□□□ 0.81
COL20A1-205ENST00000471582 MAFBQ9Y5Q3 323 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms