RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CTSHP09668 335 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 GHRP10912 638 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ATP1A3P13637 1013 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 SELPP16109 830 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CD52P31358 61 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CYP2C18P33260 490 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 TNFSF9P41273 254 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ZNF165P49910 485 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 DNM2P50570 870 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 AFF1P51825 1210 aaKnown RBP10.85□□□□□ -0.67
SF3A1-207ENST00000471342 EFNA5P52803 228 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PAK1Q13153 545 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ALCAMQ13740 583 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PPP2R5AQ15172 486 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 EDRF1Q3B7T1 1238 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 XKR4Q5GH76 650 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 SPATA1Q5VX52 437 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 LRRC8DQ7L1W4 858 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
SF3A1-207ENST00000471342 DEPTORQ8TB45 409 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 VTI1AQ96AJ9 217 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CPB2Q96IY4 423 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 IFT74Q96LB3 600 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 ACCSQ96QU6 501 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PADI3Q9ULW8 664 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PTPRJQ12913 1337 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 TOM1L1O75674 476 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 NR3C1P04150 777 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 SCP2P22307 547 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 IGFBP6P24592 240 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 CLDN10P78369 228 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 CDC42EP1Q00587 391 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 NAB2Q15742 525 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MAPK6Q16659 721 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 SEZ6Q53EL9 994 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MIIPQ5JXC2 388 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 KLHL10Q6JEL2 608 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MRPL10Q7Z7H8 261 aaKnown RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 CBWD2Q8IUF1 395 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 PRIMPOLQ96LW4 560 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MFSD14AQ96MC6 490 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 GBP3Q9H0R5 595 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 C2orf40Q9H1Z8 148 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
SF3A1-207ENST00000471342 PRMT7Q9NVM4 692 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 CPSF3Q9UKF6 684 aaKnown RBP10.84□□□□□ -0.67
SF3A1-207ENST00000471342 C9IYK1 514 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 INO80B-WBP1J3KQ70 363 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 LRRN2O75325 713 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 TIMP1P01033 207 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 CLTBP09497 229 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 GARTP22102 1010 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 PHKA2P46019 1235 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 SMTNP53814 917 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 CCL23P55773 120 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 SNRPFP62306 86 aaKnown RBP10.83□□□□□ -0.68
SF3A1-207ENST00000471342 DLG4P78352 724 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 LRRC63Q05C16 580 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 TFDP1Q14186 410 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 SLC10A6Q3KNW5 377 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 FILIP1Q7Z7B0 1213 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 TRIM59Q8IWR1 403 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 AOPEPQ8N6M6 819 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 SLC17A8Q8NDX2 589 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 DBF4BQ8NFT6 615 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 GTPBP4Q9BZE4 634 aaKnown RBP10.83□□□□□ -0.68
SF3A1-207ENST00000471342 INO80BQ9C086 356 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-207ENST00000471342 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 PCIF1Q9H4Z3 704 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 ATP11BQ9Y2G3 1177 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 NFE2L3Q9Y4A8 694 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 HES2Q9Y543 173 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 RANBP2P49792 3224 aaKnown RBP10.83□□□□□ -0.68
SF3A1-207ENST00000471342 MROH7Q68CQ1 1323 aa10.83□□□□□ -0.68
SF3A1-207ENST00000471342 ENPP3O14638 875 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 ZNF623O75123 536 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 RPLP2P05387 115 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 PBX1P40424 430 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 RGS19P49795 217 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 MYL5Q02045 173 aa10.82□□□□□ -0.68
SF3A1-207ENST00000471342 PRPF4BQ13523 1007 aaKnown RBP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 PCBP1Q15365 356 aaKnown RBP eCLIP10.82□□□□□ -0.68
SF3A1-207ENST00000471342 ZBTB6Q15916 424 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms