RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LRRC53A6NM62 1247 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 GOLGA8JA6NMD2 632 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 LDHAP00338 332 aaKnown RBP10.21□□□□□ -0.77
VPS52-216ENST00000471309 PRKCBP05771 671 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CCDC175P0C221 793 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 SRGAP2CP0DJJ0 459 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 SLC9A1P19634 815 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 RFX1P22670 979 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 TMOD1P28289 359 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 PTENP60484 403 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 DLG4P78352 724 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 NKX3-2P78367 333 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 MBTD1Q05BQ5 628 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CYP24A1Q07973 514 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 MFSD10Q14728 455 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 FSCN1Q16658 493 aaKnown RBP10.21□□□□□ -0.77
VPS52-216ENST00000471309 MAPK6Q16659 721 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CBWD6Q4V339 395 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CBWD3Q5JTY5 395 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CBWD5Q5RIA9 395 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 C1orf220Q5T0J3 134 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 MARCH8Q5T0T0 291 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 TRIM65Q6PJ69 517 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 TOGARAM2Q6ZUX3 1019 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 ZSWIM2Q8NEG5 633 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 LMBR1Q8WVP7 490 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 NLRP4Q96MN2 994 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 MAP7D2Q96T17 732 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 CRACR2AQ9BSW2 395 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 UPF3AQ9H1J1 476 aaKnown RBP10.21□□□□□ -0.77
VPS52-216ENST00000471309 FZD8Q9H461 694 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 SIX2Q9NPC8 291 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 RNF186Q9NXI6 227 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 MYO6Q9UM54 1294 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 PPP2R2CQ9Y2T4 447 aa10.21□□□□□ -0.77
VPS52-216ENST00000471309 NRCAMQ92823 1304 aa10.21□□□□□ -0.78
VPS52-216ENST00000471309 MBLAC1A4D2B0 266 aaPredicted RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 ZNF233A6NK53 670 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 ACKR2O00590 384 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 SEPT4O43236 478 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 ZEB2O60315 1214 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 KPNA6O60684 536 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 TOM1L1O75674 476 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 GNRH1P01148 92 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 SMIM10L2AP0DMW4 78 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 SMIM10L2BP0DMW5 78 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 UCHL3P15374 230 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PROZP22891 400 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 GTF2H1P32780 548 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PSEN2P49810 448 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 MXI1P50539 228 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 GJA9P57773 515 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 POLR2FP61218 127 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 CLDN10P78369 228 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PURAQ00577 322 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 PPP3CAQ08209 521 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 CETN1Q12798 172 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 MTF1Q14872 753 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PSMD6Q15008 389 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 FAM187BQ17R55 369 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 KIAA0753Q2KHM9 967 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 EPC2Q52LR7 807 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 KLHDC7AQ5VTJ3 777 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 TSHZ1Q6ZSZ6 1077 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 RRAGAQ7L523 313 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 ZNF410Q86VK4 478 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 CCDC170Q8IYT3 715 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PLEKHO2Q8TD55 490 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PARD3BQ8TEW8 1205 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 ZBTB10Q96DT7 871 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PRIMPOLQ96LW4 560 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 ACO2Q99798 780 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 FAM213AQ9BRX8 229 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 MSTO1Q9BUK6 570 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 TARS2Q9BW92 718 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 INTS2Q9H0H0 1204 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 IFT122Q9HBG6 1241 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 PRMT7Q9NVM4 692 aaPredicted RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 ANKFY1Q9P2R3 1169 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 CNTNAP2Q9UHC6 1331 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 AGO2Q9UKV8 859 aaKnown RBP10.2□□□□□ -0.78
VPS52-216ENST00000471309 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
VPS52-216ENST00000471309 SMIM35A0A1B0GVV1 85 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 LRRIQ3A6PVS8 624 aaPredicted RBP10.19□□□□□ -0.78
VPS52-216ENST00000471309 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 KIF2AO00139 706 aaPredicted RBP10.19□□□□□ -0.78
VPS52-216ENST00000471309 ABLIM1O14639 778 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 CLDN3O15551 220 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 FAM189A1O60320 539 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 OFD1O75665 1012 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 TRPA1O75762 1119 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 NDUFA10O95299 355 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 GJB1P08034 283 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 MYL3P08590 195 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 RARBP10826 455 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 ACTN1P12814 892 aa10.19□□□□□ -0.78
VPS52-216ENST00000471309 HOXD10P28358 340 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms