RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 GPR39O43194 453 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 NRP2O60462 931 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 HK1P19367 917 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
PRPF40A-206ENST00000471167 GDF5P43026 501 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 GPR3P46089 330 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 TUBA3CQ13748 450 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 C19orf54Q5BKX5 351 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 ANKS6Q68DC2 871 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 MFSD5Q6N075 450 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 TUBA3EQ6PEY2 450 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 LMBR1LQ6UX01 489 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 BTNL9Q6UXG8 535 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 APBB1IPQ7Z5R6 666 aaPredicted RBP7□□□□□ -1.29
PRPF40A-206ENST00000471167 XYLT1Q86Y38 959 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 GLB1L2Q8IW92 636 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 GSPT2Q8IYD1 628 aaKnown RBP7□□□□□ -1.29
PRPF40A-206ENST00000471167 OR52N2Q8NGI0 321 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 OR5M3Q8NGP4 307 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 SNX33Q8WV41 574 aa7□□□□□ -1.29
PRPF40A-206ENST00000471167 BRINP1O60477 761 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 FAM20BO75063 409 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 ZNF202O95125 648 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 KRT4P19013 534 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 XPAP23025 273 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 SCAND1P57086 179 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 ERVK-21P61565 698 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 TMPRSS15P98073 1019 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 CRHR2Q13324 411 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 Q6ZVL8 140 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 ZNF627Q7L945 461 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 LARP4BQ92615 738 aaKnown RBP6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 ARL8AQ96BM9 186 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 CEP95Q96GE4 821 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 KCNG1Q9UIX4 513 aa6.99□□□□□ -1.29
PRPF40A-206ENST00000471167 PHLDB1Q86UU1 1377 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 LOC105371045A0A1W2PR82 267 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 ADCY6O43306 1168 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 WNT3AP56704 352 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 NRG3P56975 720 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 CDK17Q00537 523 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 IL17RAQ96F46 866 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 ACAP3Q96P50 834 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 TRIM8Q9BZR9 551 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 KCNH6Q9H252 994 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 C14orf119Q9NWQ9 140 aa6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.98□□□□□ -1.29
PRPF40A-206ENST00000471167 GOLGA8AA7E2F4 631 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 AHRRA9YTQ3 701 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 NRP1O14786 923 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 DNAJC6O75061 913 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 MFAP3LO75121 409 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 GZMKP49863 264 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 CCT2P78371 535 aaKnown RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 DUSP2Q05923 314 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 PPP3CAQ08209 521 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 MUM1Q2TAK8 710 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 RABL3Q5HYI8 236 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 MFSD14BQ5SR56 506 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 HOXB13Q92826 284 aaPredicted RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 CPPED1Q9BRF8 314 aaPredicted RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 PDCD2LQ9BRP1 358 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 QRSL1Q9H0R6 528 aaKnown RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 ZNF768Q9H5H4 540 aaKnown RBP6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 SRRDQ9UH36 339 aa6.97□□□□□ -1.29
PRPF40A-206ENST00000471167 CADPSQ9ULU8 1353 aa6.96□□□□□ -1.29
PRPF40A-206ENST00000471167 LEFTY2O00292 366 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 PRAMEF4O60810 478 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 ITGA10O75578 1167 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 MEF2AQ02078 507 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 DCAF17Q5H9S7 520 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 METRNLQ641Q3 311 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 PCSK4Q6UW60 755 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 RHOUQ7L0Q8 258 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 DOK3Q7L591 496 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 GLB1L3Q8NCI6 653 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 REPS2Q8NFH8 660 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 MRIQ9BWK5 157 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 DMRT3Q9NQL9 472 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 PARPBPQ9NWS1 579 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 GPRC5DQ9NZD1 345 aa6.96□□□□□ -1.3
PRPF40A-206ENST00000471167 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 GNAT2P19087 354 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 FAM189BP81408 668 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 SRSF2Q01130 221 aaKnown RBP6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 VPS72Q15906 364 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 ADRM1Q16186 407 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 TAF7LQ5H9L4 462 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 TOR2AQ5JU69 321 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 METTL24Q5JXM2 366 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 PRAMEF14Q5SWL7 426 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 WDR66Q8TBY9 1149 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
PRPF40A-206ENST00000471167 RIN2Q8WYP3 895 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms