RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 TLE6Q9H808 572 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 KANSL3Q9P2N6 904 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 MTMR6Q9Y217 621 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 CLIC4Q9Y696 253 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 TTC28Q96AY4 2481 aa17.33■□□□□ 0.36
HDAC6-218ENST00000470942 CARNS1A5YM72 827 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 N4BP3O15049 544 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 STX6O43752 255 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 LONP1P36776 959 aaKnown RBP17.32■□□□□ 0.36
HDAC6-218ENST00000470942 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
HDAC6-218ENST00000470942 EFNA5P52803 228 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 PEX3P56589 373 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 CEBPZQ03701 1054 aaKnown RBP17.32■□□□□ 0.36
HDAC6-218ENST00000470942 RAD51AP2Q09MP3 1159 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 C1orf186Q6ZWK4 172 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 ZNF280BQ86YH2 543 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 KCTD17Q8N5Z5 321 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-218ENST00000470942 DRC1Q96MC2 740 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 GAD1Q99259 594 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 TCF25Q9BQ70 676 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 NXF3Q9H4D5 531 aaKnown RBP17.32■□□□□ 0.36
HDAC6-218ENST00000470942 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 PARP2Q9UGN5 583 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 VCANP13611 3396 aa17.32■□□□□ 0.36
HDAC6-218ENST00000470942 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 TTLL13PA6NNM8 815 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 K7ERI5 159 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 ACKR2O00590 384 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 FSCN2O14926 492 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 PER2O15055 1255 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 LINC01565O15544 149 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 SLC26A4O43511 780 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 DDHD2O94830 711 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 GALTP07902 379 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 AKAP5P24588 427 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 CA8P35219 290 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 MLH1P40692 756 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 SLC11A1P49279 550 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 GRIN1Q05586 938 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 ADAM15Q13444 863 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 COL19A1Q14993 1142 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 CTC1Q2NKJ3 1217 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 TMEM119Q4V9L6 283 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 PTCRAQ6ISU1 281 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 SYT2Q8N9I0 419 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 CCDC113Q9H0I3 377 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 ZSCAN16Q9H4T2 348 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 PDZD7Q9H5P4 517 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
HDAC6-218ENST00000470942 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
HDAC6-218ENST00000470942 SFI1A8K8P3 1242 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 ALDH2P05091 517 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 LTBRP36941 435 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 NPTX2P47972 431 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 NDUFV1P49821 464 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 SCNN1GP51170 649 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 DMP1Q13316 513 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-218ENST00000470942 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
HDAC6-218ENST00000470942 CLUL1Q15846 466 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 DAW1Q8N136 415 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 KMT5AQ9NQR1 393 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 MIOSQ9NXC5 875 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 KLK14Q9P0G3 267 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 FAN1Q9Y2M0 1017 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 NCOR1O75376 2440 aa17.3■□□□□ 0.36
HDAC6-218ENST00000470942 MYH15Q9Y2K3 1946 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 BDP1A6H8Y1 2624 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 TNFRSF10AO00220 468 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 B4GALT3O60512 393 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 EDN1P05305 212 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 GUCY2CP25092 1073 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 DLX2Q07687 328 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 MAPK7Q13164 816 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 PTPAQ15257 358 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 PUS10Q3MIT2 529 aaKnown RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 TMEM173Q86WV6 379 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-218ENST00000470942 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 TMEM175Q9BSA9 504 aa17.29■□□□□ 0.36
HDAC6-218ENST00000470942 NPHP3-ACAD11A0A0J9YXS1 232 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 TBX10O75333 385 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 IL9P15248 144 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 PLCG1P19174 1290 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 OR1G1P47890 313 aa17.28■□□□□ 0.36
HDAC6-218ENST00000470942 DUSP6Q16828 381 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms