RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 SBNO2Q9Y2G9 1366 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 TTC37Q6PGP7 1564 aa5.62□□□□□ -1.51
COL9A1-206ENST00000470652 UHRF1BP1LA0JNW5 1464 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 GPR39O43194 453 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 LY86O95711 162 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 ACO1P21399 889 aaKnown RBP5.61□□□□□ -1.51
COL9A1-206ENST00000470652 TACR2P21452 398 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 ADAM8P78325 824 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 TMPRSS15P98073 1019 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 PPARAQ07869 468 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 R3HDM1Q15032 1099 aaKnown RBP5.61□□□□□ -1.51
COL9A1-206ENST00000470652 UGT8Q16880 541 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 PITRM1Q5JRX3 1037 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 LMBR1LQ6UX01 489 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 MAMDC4Q6UXC1 1216 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 Q6ZSN1 163 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 GAREM2Q75VX8 874 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
COL9A1-206ENST00000470652 SLC41A1Q8IVJ1 513 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 GLB1L2Q8IW92 636 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 CMTM4Q8IZR5 234 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 ATL2Q8NHH9 583 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 IL23AQ9NPF7 189 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 KDM5BQ9UGL1 1544 aa5.61□□□□□ -1.51
COL9A1-206ENST00000470652 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
COL9A1-206ENST00000470652 UBE2QL1A1L167 161 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 GOLGA8AA7E2F4 631 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 SLPIP03973 132 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 ENPP1P22413 925 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 TRIM25Q14258 630 aaKnown RBP5.6□□□□□ -1.51
COL9A1-206ENST00000470652 CDSNQ15517 529 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 CT83Q5H943 113 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 FAM111BQ6SJ93 734 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 SGMS1Q86VZ5 419 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 PALM2Q8IXS6 379 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 D2HGDHQ8N465 521 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 EAF2Q96CJ1 260 aaPredicted RBP5.6□□□□□ -1.51
COL9A1-206ENST00000470652 TMEM176AQ96HP8 235 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 RAX2Q96IS3 184 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 TCF25Q9BQ70 676 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
COL9A1-206ENST00000470652 MENTQ9BUN1 341 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 KCTD10Q9H3F6 313 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 EVLQ9UI08 416 aaPredicted RBP5.6□□□□□ -1.51
COL9A1-206ENST00000470652 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 CDC42BPAQ5VT25 1732 aa5.6□□□□□ -1.51
COL9A1-206ENST00000470652 LRRC9Q6ZRR7 1453 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 NRP1O14786 923 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 LPLP06858 475 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 NPEPPSP55786 919 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 MGAT5Q09328 741 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 SPIDRQ14159 915 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.59□□□□□ -1.51
COL9A1-206ENST00000470652 TAS1R1Q7RTX1 841 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 Q8N1X5 172 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 ANKRD35Q8N283 1001 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 PIK3C3Q8NEB9 887 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 LMBR1Q8WVP7 490 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 AHCYL2Q96HN2 611 aaKnown RBP5.59□□□□□ -1.51
COL9A1-206ENST00000470652 PAWRQ96IZ0 340 aaKnown RBP5.59□□□□□ -1.51
COL9A1-206ENST00000470652 ING3Q9NXR8 418 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 CDY2AQ9Y6F7 541 aa5.59□□□□□ -1.51
COL9A1-206ENST00000470652 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.52
COL9A1-206ENST00000470652 DIP2BQ9P265 1576 aa5.59□□□□□ -1.52
COL9A1-206ENST00000470652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.58□□□□□ -1.52
COL9A1-206ENST00000470652 CDC42BPBQ9Y5S2 1711 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 A0A1W2PR48 441 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 CYP27B1O15528 508 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 MTHFD2P13995 350 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 POU3F3P20264 500 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-206ENST00000470652 HIBADHP31937 336 aaKnown RBP5.58□□□□□ -1.52
COL9A1-206ENST00000470652 LGALS4P56470 323 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 MRPS9P82933 396 aaKnown RBP5.58□□□□□ -1.52
COL9A1-206ENST00000470652 MEF2AQ02078 507 aaPredicted RBP5.58□□□□□ -1.52
COL9A1-206ENST00000470652 MFSD5Q6N075 450 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 PRDM12Q9H4Q4 367 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 VTA1Q9NP79 307 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 TLR9Q9NR96 1032 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 NCDNQ9UBB6 729 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 ATP8A1Q9Y2Q0 1164 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 SH3BP1Q9Y3L3 701 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 WDR7Q9Y4E6 1490 aa5.58□□□□□ -1.52
COL9A1-206ENST00000470652 PHLDB1Q86UU1 1377 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 CYR61O00622 381 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 LTA4HP09960 611 aaKnown RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 ACVRL1P37023 503 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 WNT3AP56704 352 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 SCAND1P57086 179 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 FKBP15Q5T1M5 1219 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 DDX42Q86XP3 938 aaKnown RBP eCLIP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 CMIPQ8IY22 773 aa5.57□□□□□ -1.52
COL9A1-206ENST00000470652 THEMISQ8N1K5 641 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 ZNF808Q8N4W9 903 aaPredicted RBP5.57□□□□□ -1.52
COL9A1-206ENST00000470652 ARL8AQ96BM9 186 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms