RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 NRDE2Q9H7Z3 1164 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 SPG21Q9NZD8 308 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 ARHGAP28Q9P2N2 729 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 KCNG1Q9UIX4 513 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 INPP5FQ9Y2H2 1132 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
TOP3B-215ENST00000470338 HES2Q9Y543 173 aa15.6■□□□□ 0.09
TOP3B-215ENST00000470338 CARNS1A5YM72 827 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 CCDC169A6NNP5 214 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 SFI1A8K8P3 1242 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 K7ERI5 159 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 N4BP3O15049 544 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 NPTXRO95502 500 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 IRS1P35568 1242 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 DDIT3P35638 169 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 PBX3P40426 434 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 ALDH7A1P49419 539 aaKnown RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 TFF2Q03403 129 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 RAD51AP2Q09MP3 1159 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 DMP1Q13316 513 aaPredicted RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 AAK1Q2M2I8 961 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 TJAP1Q5JTD0 557 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 SPECC1Q5M775 1068 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 NT5DC1Q5TFE4 455 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 ZNF280BQ86YH2 543 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 KRI1Q8N9T8 703 aaKnown RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 SPRYD3Q8NCJ5 442 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 LINC00301Q8NCQ3 95 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 URGCPQ8TCY9 931 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 SPIRE2Q8WWL2 714 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 RAD54LQ92698 747 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 ZNF396Q96N95 335 aaPredicted RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 NXF3Q9H4D5 531 aaKnown RBP15.59■□□□□ 0.09
TOP3B-215ENST00000470338 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 TLR9Q9NR96 1032 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 GIT1Q9Y2X7 761 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 ZMYM2Q9UBW7 1377 aa15.59■□□□□ 0.09
TOP3B-215ENST00000470338 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 FSCN2O14926 492 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 NCK2O43639 380 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 B4GALT3O60512 393 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 DDHD2O94830 711 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 F13A1P00488 732 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 GALTP07902 379 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 PLS3P13797 630 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 ERVFC1P60507 584 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 KRT17Q04695 432 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 RNASELQ05823 741 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 HYAL1Q12794 435 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 MCM6Q14566 821 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 CTC1Q2NKJ3 1217 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 PDE12Q6L8Q7 609 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 TAS1R3Q7RTX0 852 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 HACE1Q8IYU2 909 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 PABPC5Q96DU9 382 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 UBE2ZQ9H832 354 aaPredicted RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 DNAJB4Q9UDY4 337 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 PUF60Q9UHX1 559 aaKnown RBP15.58■□□□□ 0.08
TOP3B-215ENST00000470338 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 USP20Q9Y2K6 914 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 PHLPP2Q6ZVD8 1323 aa15.58■□□□□ 0.08
TOP3B-215ENST00000470338 NT5C1B-RDH14C9J2C7 533 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 ZC3H11AO75152 810 aaKnown RBP eCLIP15.57■□□□□ 0.08
TOP3B-215ENST00000470338 PPP6R2O75170 966 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 POMCP01189 267 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 BMP1P13497 986 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 LIG1P18858 919 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 AKAP5P24588 427 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 PKP1Q13835 747 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 STK38Q15208 465 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
TOP3B-215ENST00000470338 EEF1DP3Q658K8 133 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 GPBP1Q86WP2 473 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 GSTCDQ8NEC7 633 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
TOP3B-215ENST00000470338 LARP4BQ92615 738 aaKnown RBP15.57■□□□□ 0.08
TOP3B-215ENST00000470338 KCNN1Q92952 543 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 ZFP42Q96MM3 310 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 GAD1Q99259 594 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 ADPGKQ9BRR6 497 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 TMEM175Q9BSA9 504 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 APOL6Q9BWW8 343 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 MIOSQ9NXC5 875 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 STK17AQ9UEE5 414 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 TNFSF13BQ9Y275 285 aa15.57■□□□□ 0.08
TOP3B-215ENST00000470338 TCHHQ07283 1943 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 CITO14578 2027 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 NCOR1O75376 2440 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 SPTLC2O15270 562 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 SLC16A4O15374 487 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 YEATS4O95619 227 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 ALDH2P05091 517 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 MLH1P40692 756 aa15.56■□□□□ 0.08
TOP3B-215ENST00000470338 SLC11A1P49279 550 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms