RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 FOXP1Q9H334 677 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-204ENST00000469504 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
COL4A3-204ENST00000469504 IPPQ9Y573 584 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 C5orf42Q9H799 3197 aa12.19□□□□□ -0.46
COL4A3-204ENST00000469504 FAM205CA6NFA0 338 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 INO80B-WBP1J3KQ70 363 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 SOD2P04179 222 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 MBTD1Q05BQ5 628 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 CAPSQ13938 189 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 CYP26C1Q6V0L0 522 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 CABP7Q86V35 215 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 TMEM173Q86WV6 379 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-204ENST00000469504 UBALD2Q8IYN6 164 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 PBXIP1Q96AQ6 731 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 ZSCAN31Q96LW9 406 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-204ENST00000469504 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-204ENST00000469504 RHOBTB2Q9BYZ6 727 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-204ENST00000469504 GBP3Q9H0R5 595 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 SFXN1Q9H9B4 322 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 MRPL17Q9NRX2 175 aaKnown RBP12.18□□□□□ -0.46
COL4A3-204ENST00000469504 DNAJB4Q9UDY4 337 aa12.18□□□□□ -0.46
COL4A3-204ENST00000469504 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 NRP1O14786 923 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 ZBTB39O15060 712 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 JAK2O60674 1132 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 DDHD2O94830 711 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 URODP06132 367 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 GLRA2P23416 452 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
COL4A3-204ENST00000469504 DSC1Q08554 894 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 AMHR2Q16671 573 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 FAM187BQ17R55 369 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 C15orf39Q6ZRI6 1047 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 ZNF280BQ86YH2 543 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 COLGALT2Q8IYK4 626 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 FBXL6Q8N531 539 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
COL4A3-204ENST00000469504 SLC22A17Q8WUG5 538 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 FBXL18Q96ME1 805 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 HERC2P3Q9BVR0 1158 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-204ENST00000469504 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-204ENST00000469504 PRMT7Q9NVM4 692 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-204ENST00000469504 SORCS3Q9UPU3 1222 aa12.17□□□□□ -0.46
COL4A3-204ENST00000469504 TECTAO75443 2155 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ARL5CA6NH57 179 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 LILRB3O75022 631 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 POMCP01189 267 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ADH1AP07327 375 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ARF4P18085 180 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 KLRC2P26717 231 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 RPA1P27694 616 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 CLCN4P51793 760 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 PTPN5P54829 565 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 CREMQ03060 361 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 CDCA2Q69YH5 1023 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 RNF168Q8IYW5 571 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 CMASQ8NFW8 434 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 HDAC7Q8WUI4 952 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 BCL7CQ8WUZ0 217 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 KLHL5Q96PQ7 755 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 COLEC11Q9BWP8 271 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 POMKQ9H5K3 350 aa12.16□□□□□ -0.46
COL4A3-204ENST00000469504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL4A3-204ENST00000469504 ZNF318Q5VUA4 2279 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 POTEMA6NI47 508 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
COL4A3-204ENST00000469504 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 EPCAMP16422 314 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 ATP2B1P20020 1258 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 MCM7P33993 719 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 MLH1P40692 756 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 OR1G1P47890 313 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 NHLH1Q02575 133 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 GRIK3Q13003 919 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
COL4A3-204ENST00000469504 PPP2R5AQ15172 486 aa12.15□□□□□ -0.46
COL4A3-204ENST00000469504 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms