RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 SLC11A1P49279 550 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 TMEM173Q86WV6 379 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-204ENST00000469443 CDR2LQ86X02 465 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-204ENST00000469443 HACE1Q8IYU2 909 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 DEPTORQ8TB45 409 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 IGSF21Q96ID5 467 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 MSLNLQ96KJ4 702 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 IFT74Q96LB3 600 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 FAM193BQ96PV7 902 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-204ENST00000469443 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 HES2Q9Y543 173 aa20.2■□□□□ 0.82
PHGDH-204ENST00000469443 ARL5CA6NH57 179 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 HIDE1A8MVS5 230 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 MBTPS2O43462 519 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 DDHD2O94830 711 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 NPTXRO95502 500 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 POMCP01189 267 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 PRKCBP05771 671 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 SMAD4Q13485 552 aaKnown RBP20.19■□□□□ 0.82
PHGDH-204ENST00000469443 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
PHGDH-204ENST00000469443 MAPK6Q16659 721 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 HYIQ5T013 277 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 GAD1Q99259 594 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 TMEM175Q9BSA9 504 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 APOL6Q9BWW8 343 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 CCDC113Q9H0I3 377 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 NXF3Q9H4D5 531 aaKnown RBP20.19■□□□□ 0.82
PHGDH-204ENST00000469443 POLD4Q9HCU8 107 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 CLEC1BQ9P126 229 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 GIT1Q9Y2X7 761 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
PHGDH-204ENST00000469443 VPS37CA5D8V6 355 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-204ENST00000469443 BMP15O95972 392 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 MLH1P40692 756 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 BMS1Q14692 1282 aaKnown RBP20.18■□□□□ 0.82
PHGDH-204ENST00000469443 ZRSR1Q15695 479 aaKnown RBP20.18■□□□□ 0.82
PHGDH-204ENST00000469443 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
PHGDH-204ENST00000469443 VPS52Q8N1B4 723 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 KCTD17Q8N5Z5 321 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 PNMA5Q96PV4 448 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 NT5C3AQ9H0P0 336 aa20.18■□□□□ 0.82
PHGDH-204ENST00000469443 BARX2Q9UMQ3 279 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-204ENST00000469443 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 ACKR2O00590 384 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 N4BP3O15049 544 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 ALDH2P05091 517 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 EFNA5P52803 228 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 COASYQ13057 564 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 SMAD2Q15796 467 aaKnown RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 TMEM132AQ24JP5 1023 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 RINT1Q6NUQ1 792 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 VN1R2Q8NFZ6 395 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 BCL7CQ8WUZ0 217 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 INTS4Q96HW7 963 aaKnown RBP20.17■□□□□ 0.82
PHGDH-204ENST00000469443 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 PDZD7Q9H5P4 517 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 CD320Q9NPF0 282 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 MIOSQ9NXC5 875 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 PRKAG3Q9UGI9 489 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 ZMYM2Q9UBW7 1377 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 CITO14578 2027 aa20.17■□□□□ 0.82
PHGDH-204ENST00000469443 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 HIP1RO75146 1068 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 LIG1P18858 919 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 AKAP5P24588 427 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 SCNN1GP51170 649 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 RBM10P98175 930 aaKnown RBP20.16■□□□□ 0.82
PHGDH-204ENST00000469443 KCNC3Q14003 757 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 C1orf186Q6ZWK4 172 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 COLGALT2Q8IYK4 626 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 DAW1Q8N136 415 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 GJD3Q8N144 294 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 SMRP1Q8NCR6 262 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 CDK5RAP3Q96JB5 506 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 AK8Q96MA6 479 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 ZFP42Q96MM3 310 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 RUSC1Q9BVN2 902 aa20.16■□□□□ 0.82
PHGDH-204ENST00000469443 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-204ENST00000469443 NRP1O14786 923 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 SLC26A4O43511 780 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 CXCL14O95715 111 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 EDN1P05305 212 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 CTSAP10619 480 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 SYT1P21579 422 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 DSC1Q08554 894 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 TMEM184AQ6ZMB5 413 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 CABP7Q86V35 215 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 DRC1Q96MC2 740 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 PLIN2Q99541 437 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 ADPGKQ9BRR6 497 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 TIPINQ9BVW5 301 aa20.15■□□□□ 0.82
PHGDH-204ENST00000469443 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-204ENST00000469443 STK39Q9UEW8 545 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms