RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PPP2R5AQ15172 486 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 UAP1Q16222 522 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-221ENST00000469415 UBAP2Q5T6F2 1119 aaKnown RBP19.24■□□□□ 0.67
MCF2L-221ENST00000469415 TMEM206Q9H813 350 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 ZNF862O60290 1169 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 NR3C2P08235 984 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 ECHS1P30084 290 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 ACOT2P49753 483 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 IFFO1Q0D2I5 559 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 HES6Q96HZ4 224 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 ISCUQ9H1K1 167 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 PXMP2Q9NR77 195 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 TMEM59LQ9UK28 342 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 STXBP5LQ9Y2K9 1186 aa19.24■□□□□ 0.67
MCF2L-221ENST00000469415 UTP11Q9Y3A2 253 aaKnown RBP19.24■□□□□ 0.67
MCF2L-221ENST00000469415 WDR46O15213 610 aaKnown RBP19.23■□□□□ 0.67
MCF2L-221ENST00000469415 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 NR1D1P20393 614 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 GMPSP49915 693 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-221ENST00000469415 DMP1Q13316 513 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-221ENST00000469415 SPOPLQ6IQ16 392 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 PASD1Q8IV76 773 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 ZNF653Q96CK0 615 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 FEZ2Q9UHY8 353 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-221ENST00000469415 ANKRD62A6NC57 917 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 SSR1P43307 286 aaKnown RBP19.23■□□□□ 0.67
MCF2L-221ENST00000469415 VPS41P49754 854 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 PSMC5P62195 406 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 PCNX4Q63HM2 1172 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 FAM83AQ86UY5 434 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 CCDC26Q8TAB7 109 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 TAOK3Q9H2K8 898 aa19.23■□□□□ 0.67
MCF2L-221ENST00000469415 WDR64B1ANS9 1081 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 DDX3YO15523 660 aaKnown RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 CCDC172P0C7W6 258 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 SLCO1A2P46721 670 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 SMTNP53814 917 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 FSTL1Q12841 308 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 TRIP13Q15645 432 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 MAGOHBQ96A72 148 aaKnown RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 TEPSINQ96N21 525 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 PSMD1Q99460 953 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 SH3GL2Q99962 352 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 TBX20Q9UMR3 447 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 NOVA2Q9UNW9 492 aaKnown RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 ADGRA3Q8IWK6 1321 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 LIG3P49916 1009 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 DR1Q01658 176 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 KRT71Q3SY84 523 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 VWA5AO00534 786 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 HMGB2P26583 209 aaKnown RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 BIRC3Q13489 604 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 SLFN11Q7Z7L1 901 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 AGBL3Q8NEM8 1001 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 WHAMMQ8TF30 809 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 CPA5Q8WXQ8 436 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 ANKFY1Q9P2R3 1169 aa19.22■□□□□ 0.67
MCF2L-221ENST00000469415 CNOT7Q9UIV1 285 aaKnown RBP19.22■□□□□ 0.67
MCF2L-221ENST00000469415 TNNI1P19237 187 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 SEPT14Q6ZU15 432 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 EPS8L1Q8TE68 723 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 FAM212AQ96EL1 285 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 TBC1D22BQ9NU19 505 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 NENFQ9UMX5 172 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 EIF3HO15372 352 aaKnown RBP eCLIP19.21■□□□□ 0.674e-7■□□□□ 9.5
MCF2L-221ENST00000469415 MYZAPP0CAP1 466 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 PPATQ06203 517 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 SCARA3Q6AZY7 606 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 TMEM161BQ8NDZ6 487 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 ZBTB45Q96K62 511 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-221ENST00000469415 CCDC113Q9H0I3 377 aa19.21■□□□□ 0.67
MCF2L-221ENST00000469415 GRIN2DO15399 1336 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 PYGMP11217 842 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 CHRNB2P17787 502 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 CCDC60Q8IWA6 550 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-221ENST00000469415 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 KCND2Q9NZV8 630 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 PGAP2Q9UHJ9 254 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 DAAM1Q9Y4D1 1078 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 BTNL10A8MVZ5 291 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 E7EVH7 732 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 EBAG9O00559 213 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 TBC1D12O60347 775 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-221ENST00000469415 GPC5P78333 572 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ZFYVE27Q5T4F4 411 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 SV2AQ7L0J3 742 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ZDHHC14Q8IZN3 488 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 MDM1Q8TC05 714 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ZNF526Q8TF50 670 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-221ENST00000469415 C1orf54Q8WWF1 131 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ATP6V1G3Q96LB4 118 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 PCDHA10Q9Y5I2 948 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 CENPFP49454 3210 aa19.2■□□□□ 0.66
MCF2L-221ENST00000469415 ATP2C2O75185 946 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms