RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CGNQ9P2M7 1197 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 PIN4Q9Y237 131 aaKnown RBP8.9□□□□□ -0.98
HDAC6-216ENST00000468949 CNTNAP2Q9UHC6 1331 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 SMTNL1A8MU46 457 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 GOLGA6L19H0YKK7 550 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ACKR2O00590 384 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 N4BP3O15049 544 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ZSCAN20P17040 1043 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 CCNE1P24864 410 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 RPL13P26373 211 aaKnown RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 AXLP30530 894 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ZNF445P59923 1031 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 FPGSQ05932 587 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 LRRC63Q05C16 580 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 RBL2Q08999 1139 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 BMT2Q1RMZ1 405 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ZNF568Q3ZCX4 644 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 COBLL1Q53SF7 1204 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 CT47A1Q5JQC4 288 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ATF7IP2Q5U623 682 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 SLFN12LQ6IEE8 588 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 HACE1Q8IYU2 909 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ADSSL1Q8N142 457 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 TMEM199Q8N511 208 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 PDCD7Q8N8D1 485 aaKnown RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 ANKRD20A12PQ8NF67 263 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 SCFD1Q8WVM8 642 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 POMGNT1Q8WZA1 660 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 BADQ92934 168 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 P2RX5Q93086 422 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 WNT8BQ93098 351 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 NOC4LQ9BVI4 516 aaKnown RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 FGFBP2Q9BYJ0 223 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 IFT122Q9HBG6 1241 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 MAGEC2Q9UBF1 373 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-216ENST00000468949 RWDD2AQ9UIY3 292 aa8.89□□□□□ -0.99
HDAC6-216ENST00000468949 CLDN3O15551 220 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CSDE1O75534 798 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 TOM1L1O75674 476 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CHRNA1P02708 482 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 TPM2P07951 284 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 EPB41P11171 864 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 IBSPP21815 317 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FGFR4P22455 802 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 ERCC5P28715 1186 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 RFC2P35250 354 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 ZNF165P49910 485 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CYP2J2P51589 502 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CCL23P55773 120 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 STX17P56962 302 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 SNRPFP62306 86 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 MYL5Q02045 173 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 MGAT3Q09327 533 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 NOLC1Q14978 699 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 TRIM71Q2Q1W2 868 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 DCAF4L1Q3SXM0 396 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 LRIT3Q3SXY7 679 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FAM26DQ5JW98 314 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FBXO47Q5MNV8 452 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 TWF2Q6IBS0 349 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 ZPBP2Q6X784 338 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FAM114A1Q8IWE2 563 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 GLIS3Q8NEA6 775 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 SEPT8Q92599 483 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 APBB2Q92870 758 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CCDC51Q96ER9 411 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CPB2Q96IY4 423 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CTAGE1Q96RT6 745 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FIZ1Q96SL8 496 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 MSTO1Q9BUK6 570 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 TARS2Q9BW92 718 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 IFIH1Q9BYX4 1025 aaKnown RBP8.88□□□□□ -0.99
HDAC6-216ENST00000468949 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 AGPAT5Q9NUQ2 364 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 FRMD4BQ9Y2L6 1034 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 SQORQ9Y6N5 450 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 DNAH12Q6ZR08 3092 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 MYH11P35749 1972 aa8.88□□□□□ -0.99
HDAC6-216ENST00000468949 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 PDXKO00764 312 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 KIAA0391O15091 583 aaKnown RBP8.87□□□□□ -0.99
HDAC6-216ENST00000468949 CETN3O15182 167 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 B4GALT5O43286 388 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 TSPAN1O60635 241 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 EXOC3O60645 756 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 TIMP1P01033 207 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 NR3C1P04150 777 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 IQCF3P0C7M6 154 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 SKIP12755 728 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 ARF4P18085 180 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-216ENST00000468949 BMP6P22004 513 aa8.87□□□□□ -0.99
HDAC6-216ENST00000468949 NR2F2P24468 414 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms