RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PMS2P1A4D2B8 440 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 PLSCR1O15162 318 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 ZRANB2O95218 330 aaKnown RBP eCLIP6.7□□□□□ -1.34
LSM5-209ENST00000468872 PFKMP08237 780 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 PF4V1P10720 104 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 OSMP13725 252 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 AGXTP21549 392 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 GRM7Q14831 915 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 MLC1Q15049 377 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 MIIPQ5JXC2 388 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 EFCAB2Q5VUJ9 269 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 NXNQ6DKJ4 435 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 KCTD10Q9H3F6 313 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
LSM5-209ENST00000468872 SAE1Q9UBE0 346 aaPredicted RBP6.7□□□□□ -1.34
LSM5-209ENST00000468872 ANKRD6Q9Y2G4 727 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 GIT1Q9Y2X7 761 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 HS3ST3A1Q9Y663 406 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 NUMBLQ9Y6R0 609 aa6.7□□□□□ -1.34
LSM5-209ENST00000468872 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 CT47B1P0C2W7 299 aaPredicted RBP6.69□□□□□ -1.34
LSM5-209ENST00000468872 MRPS9P82933 396 aaKnown RBP6.69□□□□□ -1.34
LSM5-209ENST00000468872 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 KLHDC10Q6PID8 442 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 SLC41A1Q8IVJ1 513 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 OR5AN1Q8NGI8 311 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 MTG2Q9H4K7 406 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 MAGEL2Q9UJ55 1249 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 DENND2AQ9ULE3 1009 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
LSM5-209ENST00000468872 NPIPB8E9PQR5 432 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 PCDH8O95206 1070 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 ATF3P18847 181 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 C5AR1P21730 350 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 ACRV1P26436 265 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 LGALS4P56470 323 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 TBX4P57082 545 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 RIN1Q13671 783 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 SAFB2Q14151 953 aaKnown RBP eCLIP6.68□□□□□ -1.34
LSM5-209ENST00000468872 MUM1Q2TAK8 710 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 CXorf57Q6NSI4 855 aaKnown RBP6.68□□□□□ -1.34
LSM5-209ENST00000468872 C1orf210Q8IVY1 113 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 TSPEARQ8WU66 669 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 SSH1Q8WYL5 1049 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 RPGRQ92834 1020 aaKnown RBP6.68□□□□□ -1.34
LSM5-209ENST00000468872 LPPQ93052 612 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 HSPBAP1Q96EW2 488 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 TMEM176AQ96HP8 235 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 SLC2A13Q96QE2 648 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
LSM5-209ENST00000468872 TLR9Q9NR96 1032 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 GEMIN8Q9NWZ8 242 aaKnown RBP6.68□□□□□ -1.34
LSM5-209ENST00000468872 GABBR1Q9UBS5 961 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 DPP7Q9UHL4 492 aa6.68□□□□□ -1.34
LSM5-209ENST00000468872 PNMA8BQ9ULN7 279 aaPredicted RBP6.68□□□□□ -1.34
LSM5-209ENST00000468872 OPHN1O60890 802 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 IL33O95760 270 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 MTHFD2P13995 350 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 HIBADHP31937 336 aaKnown RBP6.67□□□□□ -1.34
LSM5-209ENST00000468872 ADCY7P51828 1080 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 HMGA2P52926 109 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 BCAR1P56945 870 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 SESN2P58004 480 aaPredicted RBP6.67□□□□□ -1.34
LSM5-209ENST00000468872 ANTXR2P58335 489 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 ATP2C1P98194 919 aaPredicted RBP6.67□□□□□ -1.34
LSM5-209ENST00000468872 DGKDQ16760 1214 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 ADGRE4PQ86SQ3 457 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 IL17DQ8TAD2 202 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 AUTS2Q8WXX7 1259 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 RABGGTAQ92696 567 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 GFM2Q969S9 779 aaKnown RBP6.67□□□□□ -1.34
LSM5-209ENST00000468872 SLC7A6OSQ96CW6 309 aaPredicted RBP6.67□□□□□ -1.34
LSM5-209ENST00000468872 MRIQ9BWK5 157 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 PCED1AQ9H1Q7 454 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 PRSS50Q9UI38 385 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 TUBD1Q9UJT1 453 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 ZBTB21Q9ULJ3 1066 aa6.67□□□□□ -1.34
LSM5-209ENST00000468872 A0A0A6YYJ9 748 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 DGCR2P98153 550 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 HHEXQ03014 270 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 PPARAQ07869 468 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 KLF10Q13118 480 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 ACAP1Q15027 740 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 D2HGDHQ8N465 521 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 NUP88Q99567 741 aaPredicted RBP6.66□□□□□ -1.34
LSM5-209ENST00000468872 CSRNP2Q9H175 543 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 SLC6A15Q9H2J7 730 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 IFT122Q9HBG6 1241 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 KCMF1Q9P0J7 381 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 USP18Q9UMW8 372 aa6.66□□□□□ -1.34
LSM5-209ENST00000468872 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 C2orf78A6NCI8 922 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 KIF3BO15066 747 aa6.65□□□□□ -1.34
LSM5-209ENST00000468872 PRC1O43663 620 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms