RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 EFNA5P52803 228 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 BMS1Q14692 1282 aaKnown RBP20.05■□□□□ 0.8
CGREF1-208ENST00000467539 MAPK6Q16659 721 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 DUSP6Q16828 381 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 RINT1Q6NUQ1 792 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 TMEM184AQ6ZMB5 413 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 C1orf186Q6ZWK4 172 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 KCNK18Q7Z418 384 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 DDX53Q86TM3 631 aaKnown RBP20.05■□□□□ 0.8
CGREF1-208ENST00000467539 DEPTORQ8TB45 409 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 PNMA5Q96PV4 448 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 FAM193BQ96PV7 902 aaPredicted RBP20.05■□□□□ 0.8
CGREF1-208ENST00000467539 TMEM175Q9BSA9 504 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 TRIM6Q9C030 488 aaPredicted RBP20.05■□□□□ 0.8
CGREF1-208ENST00000467539 CCDC113Q9H0I3 377 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 NT5C3AQ9H0P0 336 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 ENTPD7Q9NQZ7 604 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 CLEC1BQ9P126 229 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 FAN1Q9Y2M0 1017 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 HES2Q9Y543 173 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 MUC3AQ02505 3323 aa20.05■□□□□ 0.8
CGREF1-208ENST00000467539 ARL5CA6NH57 179 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 HIDE1A8MVS5 230 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 TBX10O75333 385 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 CXCL14O95715 111 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 POMCP01189 267 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 SYT1P21579 422 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 SLC11A1P49279 550 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 NDUFV1P49821 464 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 PRPF4BQ13523 1007 aaKnown RBP20.04■□□□□ 0.8
CGREF1-208ENST00000467539 KCNC3Q14003 757 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 PLPP4Q5VZY2 271 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 CDR2LQ86X02 465 aaPredicted RBP20.04■□□□□ 0.8
CGREF1-208ENST00000467539 SYT2Q8N9I0 419 aaPredicted RBP20.04■□□□□ 0.8
CGREF1-208ENST00000467539 GAD1Q99259 594 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 GBP3Q9H0R5 595 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 MIOSQ9NXC5 875 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 STK39Q9UEW8 545 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 CD207Q9UJ71 328 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 ATG2AQ2TAZ0 1938 aa20.04■□□□□ 0.8
CGREF1-208ENST00000467539 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 TTLL13PA6NNM8 815 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 K7ERI5 159 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 N4BP3O15049 544 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 MBTPS2O43462 519 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 B4GALT3O60512 393 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 NPTXRO95502 500 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 PRKCBP05771 671 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 COASYQ13057 564 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 SMC1AQ14683 1233 aaKnown RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 TMEM173Q86WV6 379 aaPredicted RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 DAW1Q8N136 415 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 VPS52Q8N1B4 723 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 NTPCRQ9BSD7 190 aaKnown RBP20.03■□□□□ 0.8
CGREF1-208ENST00000467539 TIPINQ9BVW5 301 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 C17orf75Q9HAS0 396 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 PRKAG3Q9UGI9 489 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 KCNG1Q9UIX4 513 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 IRAK3Q9Y616 596 aa20.03■□□□□ 0.8
CGREF1-208ENST00000467539 C2orf71A6NGG8 1288 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 NRP1O14786 923 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 GLP2RO95838 553 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 GUCY2CP25092 1073 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 ZRSR1Q15695 479 aaKnown RBP20.02■□□□□ 0.8
CGREF1-208ENST00000467539 SMAD2Q15796 467 aaKnown RBP20.02■□□□□ 0.8
CGREF1-208ENST00000467539 COLGALT2Q8IYK4 626 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 GSTCDQ8NEC7 633 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 SNX21Q969T3 373 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 DRC1Q96MC2 740 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 RUSC1Q9BVN2 902 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 NXF3Q9H4D5 531 aaKnown RBP20.02■□□□□ 0.8
CGREF1-208ENST00000467539 PDZD7Q9H5P4 517 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 CD320Q9NPF0 282 aa20.02■□□□□ 0.8
CGREF1-208ENST00000467539 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
CGREF1-208ENST00000467539 HIP1RO75146 1068 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 AKAP5P24588 427 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
CGREF1-208ENST00000467539 UBA7P41226 1012 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 NPTX2P47972 431 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 PEX3P56589 373 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 DSC1Q08554 894 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 MAPK7Q13164 816 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 SMAD4Q13485 552 aaKnown RBP20.01■□□□□ 0.79
CGREF1-208ENST00000467539 GIT2Q14161 759 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 CLUL1Q15846 466 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 TMEM119Q4V9L6 283 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 CABP7Q86V35 215 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 GJD3Q8N144 294 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 VN1R2Q8NFZ6 395 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 BCL7CQ8WUZ0 217 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-208ENST00000467539 CDK5RAP3Q96JB5 506 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 ZFP42Q96MM3 310 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 APOL6Q9BWW8 343 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 ZBP1Q9H171 429 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 TMEM134Q9H6X4 195 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 PARP2Q9UGN5 583 aa20.01■□□□□ 0.79
CGREF1-208ENST00000467539 USP20Q9Y2K6 914 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms