RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ACCSLQ4AC99 568 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 CTU1Q7Z7A3 348 aaKnown RBP16.69■□□□□ 0.26
SNED1-208ENST00000466618 TMBIM4Q9HC24 238 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 PKD2L1Q9P0L9 805 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
SNED1-208ENST00000466618 GMNCA6NCL1 334 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 C5orf60A6NFR6 353 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 TRAPPC3O43617 180 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 GAS7O60861 476 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 SKAP2O75563 359 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 RPN1P04843 607 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 SMPD1P17405 629 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 TECP42680 631 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 DNM2P50570 870 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 GUCY2FP51841 1108 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 CDK17Q00537 523 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 DUSP28Q4G0W2 176 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 ADSSL1Q8N142 457 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 GIMAP8Q8ND71 665 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 EPB41L5Q9HCM4 733 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 MYH10P35580 1976 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 MARCH6O60337 910 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 HEXIM1O94992 359 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 RPSAP08865 295 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 THAP9Q9H5L6 903 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 GNEQ9Y223 722 aaKnown RBP16.68■□□□□ 0.26
SNED1-208ENST00000466618 PCDHA13Q9Y5I0 950 aa16.68■□□□□ 0.26
SNED1-208ENST00000466618 USO1O60763 962 aaKnown RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 DNAJC8O75937 253 aaPredicted RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 CCNE2O96020 404 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 LONP1P36776 959 aaKnown RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 PAFAH1B1P43034 410 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 GUCY2DQ02846 1103 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 BIRC2Q13490 618 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 CELF3Q5SZQ8 465 aaKnown RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 CYFIP1Q7L576 1253 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 CASKIN2Q8WXE0 1202 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 IFT81Q8WYA0 676 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 COPS5Q92905 334 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 MS4A14Q96JA4 679 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 TLR10Q9BXR5 811 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 UNC45AQ9H3U1 944 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 EXOC1Q9NV70 894 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 PLAAQ9Y263 795 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 GGPS1O95749 300 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 METTL7BQ6UX53 244 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 RETREG2Q8NC44 543 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 IFIH1Q9BYX4 1025 aaKnown RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 JPH1Q9HDC5 661 aaPredicted RBP16.67■□□□□ 0.26
SNED1-208ENST00000466618 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 SALL4Q9UJQ4 1053 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 TELO2Q9Y4R8 837 aa16.67■□□□□ 0.26
SNED1-208ENST00000466618 MCM3APO60318 1980 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 POTEMA6NI47 508 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 EML1O00423 815 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 NKRFO15226 690 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNED1-208ENST00000466618 ATP6V1G2O95670 118 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 INHAP05111 366 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 AKR1A1P14550 325 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 HSPA9P38646 679 aaKnown RBP16.66■□□□□ 0.26
SNED1-208ENST00000466618 ELF3P78545 371 aaPredicted RBP16.66■□□□□ 0.26
SNED1-208ENST00000466618 SPA17Q15506 151 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 TRADDQ15628 312 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
SNED1-208ENST00000466618 ZNF746Q6NUN9 644 aaPredicted RBP16.66■□□□□ 0.26
SNED1-208ENST00000466618 CCDC42Q96M95 316 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 AK8Q96MA6 479 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 SLC9A2Q9UBY0 812 aa16.66■□□□□ 0.26
SNED1-208ENST00000466618 SEPT4O43236 478 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 ATG7O95352 703 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 CCND3P30281 292 aaPredicted RBP16.65■□□□□ 0.26
SNED1-208ENST00000466618 KRT76Q01546 638 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 ARFGAP2Q8N6H7 521 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 CCT6BQ92526 530 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 NOD2Q9HC29 1040 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 ARHGAP20Q9P2F6 1191 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 EME2A4GXA9 379 aaPredicted RBP16.65■□□□□ 0.26
SNED1-208ENST00000466618 KLHL33A6NCF5 533 aa16.65■□□□□ 0.26
SNED1-208ENST00000466618 DDX39AO00148 427 aaKnown RBP16.65■□□□□ 0.26
SNED1-208ENST00000466618 SARNPP82979 210 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms