RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SCLYQ96I15 445 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 DUSP9Q99956 384 aaKnown RBP12.22□□□□□ -0.45
VCP-204ENST00000466100 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 GBP3Q9H0R5 595 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 TMX1Q9H3N1 280 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PADI3Q9ULW8 664 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 ST3GAL5Q9UNP4 418 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 EXOC7Q9UPT5 735 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 TRAF3IP3Q9Y228 551 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 HNRNPDLO14979 420 aaKnown RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 FAM189A1O60320 539 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 TOM1L1O75674 476 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 ERLIN2O94905 339 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 PARNO95453 639 aaKnown RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 ERCC5P28715 1186 aaPredicted RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 AXLP30530 894 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 CCL23P55773 120 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 SNRPFP62306 86 aaKnown RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 LRRC63Q05C16 580 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 PAK2Q13177 524 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 DSC3Q14574 896 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 TCTN1Q2MV58 587 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 ATF7IP2Q5U623 682 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 ANKRD40Q6AI12 368 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 LRRC55Q6ZSA7 311 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 C7orf61Q8IZ16 206 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 CPB2Q96IY4 423 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 BPIFA3Q9BQP9 254 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 CGNQ9P2M7 1197 aaKnown RBP12.21□□□□□ -0.45
VCP-204ENST00000466100 DACH1Q9UI36 760 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
VCP-204ENST00000466100 LAMA3Q16787 3333 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 A0A0B4J269 797 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 GPR182O15218 404 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 MGEA5O60502 916 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 RAG1P15918 1043 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 RFC2P35250 354 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 LIG4P49917 911 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 STX17P56962 302 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 MCL1Q07820 350 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 UBXN11Q5T124 520 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 MPZL3Q6UWV2 235 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 SLC9A9Q8IVB4 645 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 SYCP3Q8IZU3 236 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 LINC01599Q8WXQ3 324 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 CCDC51Q96ER9 411 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 BICD1Q96G01 975 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
VCP-204ENST00000466100 CDT1Q9H211 546 aa12.2□□□□□ -0.46
VCP-204ENST00000466100 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
VCP-204ENST00000466100 N4BP3O15049 544 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 CLIC2O15247 247 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 NR3C1P04150 777 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 GARTP22102 1010 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 MYBPC2Q14324 1141 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 NCAPHQ15003 741 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 IQCB1Q15051 598 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 NOTUMQ6P988 496 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
VCP-204ENST00000466100 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
VCP-204ENST00000466100 ZSWIM2Q8NEG5 633 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 ENOX1Q8TC92 643 aaKnown RBP12.19□□□□□ -0.46
VCP-204ENST00000466100 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 CHST12Q9NRB3 414 aa12.19□□□□□ -0.46
VCP-204ENST00000466100 FNDC1Q4ZHG4 1894 aaPredicted RBP12.19□□□□□ -0.46
VCP-204ENST00000466100 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 TDRD15B5MCY1 1934 aaKnown RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 BICDL2A1A5D9 508 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 IKBKBO14920 756 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 CALUO43852 315 aaPredicted RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 EVI5O60447 810 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 CAVIN2O95810 425 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 MCF2P10911 925 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 CSF2RAP15509 400 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 ZNF165P49910 485 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 NFX1Q12986 1120 aaKnown RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 NOLC1Q14978 699 aaKnown RBP eCLIP12.18□□□□□ -0.46
VCP-204ENST00000466100 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 SLFN12LQ6IEE8 588 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 SLC27A1Q6PCB7 646 aa12.18□□□□□ -0.46
VCP-204ENST00000466100 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
VCP-204ENST00000466100 RTN4RL1Q86UN2 441 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms