RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C7orf43Q8WVR3 580 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 RMDN2Q96LZ7 410 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 CDCA7Q9BWT1 371 aaPredicted RBP21.17■□□□□ 0.98
SDF4-205ENST00000465727 ANO3Q9BYT9 981 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 LRMDAQ9H2I8 198 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 LRRC19Q9H756 370 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ETNK1Q9HBU6 452 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 KCNK9Q9NPC2 374 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ZNF831Q5JPB2 1677 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 UBE4BO95155 1302 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ADGRA3Q8IWK6 1321 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 EYA4O95677 639 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 BCRP11274 1271 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 BRAFP15056 766 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ITIH2P19823 946 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 OTUD6AQ7L8S5 288 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 SLF2Q8IX21 1173 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 RNPEPL1Q9HAU8 725 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 LGALS13Q9UHV8 139 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ZMYM2Q9UBW7 1377 aa21.17■□□□□ 0.98
SDF4-205ENST00000465727 ANKRD63C9JTQ0 380 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 TTC4O95801 387 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 GNAZP19086 355 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 PALB2Q86YC2 1186 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 ANKRD42Q8N9B4 389 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 CD101Q93033 1021 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 FAM163AQ96GL9 167 aaPredicted RBP21.16■□□□□ 0.98
SDF4-205ENST00000465727 TMEM237Q96Q45 408 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 NKIRAS1Q9NYS0 192 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 CTNNAL1Q9UBT7 734 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 FESP07332 822 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 COMTP21964 271 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 CALB2P22676 271 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 PEX19P40855 299 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 ABL2P42684 1182 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 MARCKSL1P49006 195 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 RHBDL3P58872 404 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 CAV1Q03135 178 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 SETDB1Q15047 1291 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 Q4G0T1 1027 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 TBC1D9BQ66K14 1250 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 ZNF772Q68DY9 489 aaPredicted RBP21.16■□□□□ 0.98
SDF4-205ENST00000465727 C15orf52Q6ZUT6 534 aaKnown RBP21.16■□□□□ 0.98
SDF4-205ENST00000465727 SYDE1Q6ZW31 735 aaPredicted RBP21.16■□□□□ 0.98
SDF4-205ENST00000465727 INPP5DQ92835 1189 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 OSBPL1AQ9BXW6 950 aa21.16■□□□□ 0.98
SDF4-205ENST00000465727 RSPH10B2B2RC85 870 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 MEIS1O00470 390 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 ACSL3O95573 720 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 FTLP02792 175 aaPredicted RBP21.15■□□□□ 0.98
SDF4-205ENST00000465727 RSPH10BP0C881 870 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 MRPS35P82673 323 aaKnown RBP21.15■□□□□ 0.98
SDF4-205ENST00000465727 MYL7Q01449 175 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 SIX1Q15475 284 aaPredicted RBP21.15■□□□□ 0.98
SDF4-205ENST00000465727 RHBDF2Q6PJF5 856 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 INTS8Q75QN2 995 aaKnown RBP21.15■□□□□ 0.98
SDF4-205ENST00000465727 FAM20AQ96MK3 541 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 DDX23Q9BUQ8 820 aaKnown RBP21.15■□□□□ 0.98
SDF4-205ENST00000465727 PLVAPQ9BX97 442 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 AAASQ9NRG9 546 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 ANKIB1Q9P2G1 1089 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 FRMD4BQ9Y2L6 1034 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 PTPN22Q9Y2R2 807 aa21.15■□□□□ 0.98
SDF4-205ENST00000465727 AHCYL1O43865 530 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 PYGMP11217 842 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 MAN1A1P33908 653 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 MGAT5Q09328 741 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 KCNA1Q09470 495 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 CBWD6Q4V339 395 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 CBWD3Q5JTY5 395 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 CBWD5Q5RIA9 395 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 AP1ARQ63HQ0 302 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 CGB2Q6NT52 195 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 ECHDC2Q86YB7 292 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 LMNTD2Q8IXW0 634 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 SH3TC2Q8TF17 1288 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 CRYGNQ8WXF5 182 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 POLR3CQ9BUI4 534 aaPredicted RBP21.14■□□□□ 0.98
SDF4-205ENST00000465727 RPL26L1Q9UNX3 145 aaKnown RBP21.14■□□□□ 0.98
SDF4-205ENST00000465727 TRIM33Q9UPN9 1127 aa21.14■□□□□ 0.98
SDF4-205ENST00000465727 LINGO3P0C6S8 592 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 CREB1P16220 341 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 YARSP54577 528 aaKnown RBP21.14■□□□□ 0.97
SDF4-205ENST00000465727 GABPAQ06546 454 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 RNF207Q6ZRF8 634 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 HS2ST1Q7LGA3 356 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 NBPF5PQ86XG9 351 aaPredicted RBP21.14■□□□□ 0.97
SDF4-205ENST00000465727 GDAP1Q8TB36 358 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 RUSC1Q9BVN2 902 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 BHMT2Q9H2M3 363 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 RABGAP1Q9Y3P9 1069 aa21.14■□□□□ 0.97
SDF4-205ENST00000465727 USP17L15C9J2P7 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L10C9JJH3 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L13C9JLJ4 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L11C9JVI0 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L18D6R9N7 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L22D6RA61 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L17D6RBQ6 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L19D6RCP7 530 aa21.13■□□□□ 0.97
SDF4-205ENST00000465727 USP17L20D6RJB6 530 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms