RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-225	ENST00000465158	ECM1	Q16610	540 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	HSDL1	Q3SXM5	330 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	FILIP1L	Q4L180	1135 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	ODR4	Q5SWX8	454 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	SPATA1	Q5VX52	437 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	IER5	Q5VY09	327 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	ANO5	Q75V66	913 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	TAS1R3	Q7RTX0	852 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	KCNK18	Q7Z418	384 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	TLK2	Q86UE8	772 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	CCDC60	Q8IWA6	550 aa	Predicted RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	FAM178B	Q8IXR5	827 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	ADSSL1	Q8N142	457 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	MYCT1	Q8N699	235 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	STAM	Q92783	540 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	KCNN1	Q92952	543 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	ZIC5	Q96T25	663 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	REEP2	Q9BRK0	252 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	NTPCR	Q9BSD7	190 aa	Known RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	DNAJC25	Q9H1X3	360 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	TUT1	Q9H6E5	874 aa	Known RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	MRPL44	Q9H9J2	332 aa	Known RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	ETNK1	Q9HBU6	452 aa		7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	GNE	Q9Y223	722 aa	Known RBP	7.37	□□□□□ -1.23
RBM39-225	ENST00000465158	NRCAM	Q92823	1304 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	PDXK	O00764	312 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	KIAA0391	O15091	583 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	FOXN1	O15353	648 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	DYNC1LI2	O43237	492 aa	Predicted RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CALU	O43852	315 aa	Predicted RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	MAF	O75444	373 aa	Predicted RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ARIH2	O95376	493 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	LGALS2	P05162	132 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	MMP3	P08254	477 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CYBA	P13498	195 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CCNE1	P24864	410 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	EEF1G	P26641	437 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CYP2C19	P33261	490 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	NAMPT	P43490	491 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	GJA9	P57773	515 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	FKBP3	Q00688	224 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	PRKCZ	Q05513	592 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	PPP2R3A	Q06190	1150 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	EHHADH	Q08426	723 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	TARBP2	Q15633	366 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	EDRF1	Q3B7T1	1238 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	DPCR1	Q3MIW9	517 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ARSH	Q5FYA8	562 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CENPP	Q6IPU0	288 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	HS2ST1	Q7LGA3	356 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	USP37	Q86T82	979 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	RNF180	Q86T96	592 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	GRAMD1C	Q8IYS0	662 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ARRDC4	Q8NCT1	418 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ZNF507	Q8TCN5	953 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	TMEM174	Q8WUU8	243 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	AFG1L	Q8WV93	481 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	UIMC1	Q96RL1	719 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ZMYND15	Q9H091	742 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	NUCKS1	Q9H1E3	243 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	UPF3A	Q9H1J1	476 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	C2orf40	Q9H1Z8	148 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	ZHX3	Q9H4I2	956 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	THAP9	Q9H5L6	903 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	DHX33	Q9H6R0	707 aa	Known RBP	7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	CBX8	Q9HC52	389 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	PDGFC	Q9NRA1	345 aa		7.36	□□□□□ -1.23
RBM39-225	ENST00000465158	SYNRG	Q9UMZ2	1314 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	POM121C	A8CG34	1229 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	ZNF862	O60290	1169 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	USO1	O60763	962 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	HIP1R	O75146	1068 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	GCNT3	O95395	438 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	STAU1	O95793	577 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	CST5	P28325	142 aa	Predicted RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	CNGA1	P29973	690 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	GRK4	P32298	578 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	PRCP	P42785	496 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	MAP2K3	P46734	347 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	SNRPN	P63162	240 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	PTPN11	Q06124	597 aa	Predicted RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	NCBP1	Q09161	790 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	STRN3	Q13033	797 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	EMC2	Q15006	297 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	IQCB1	Q15051	598 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	NFIL3	Q16649	462 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	FSCN1	Q16658	493 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	KNOP1	Q1ED39	458 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	BMT2	Q1RMZ1	405 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	MTERF2	Q49AM1	385 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	FAM102B	Q5T8I3	360 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	UTP14C	Q5TAP6	766 aa	Known RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	SARM1	Q6SZW1	724 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	ZNF720	Q7Z2F6	126 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	NME8	Q8N427	588 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	CD99L2	Q8TCZ2	262 aa		7.35	□□□□□ -1.23
RBM39-225	ENST00000465158	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms